RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TNFP01375 233 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 FAM87AP0C7U9 286 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 JMJD7P0C870 316 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 LIPCP11150 499 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 GLB1P16278 677 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SUOXP51687 545 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 MAPK10P53779 464 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 B4GALNT1Q00973 533 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 EIF3IQ13347 325 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 C14orf28Q4W4Y0 310 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 AFMIDQ63HM1 303 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SPECC1LQ69YQ0 1117 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 ERAP2Q6P179 960 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 DPPA4Q7L190 304 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 NRROSQ86YC3 692 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 JPH3Q8WXH2 748 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 USP7Q93009 1102 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SGF29Q96ES7 293 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 ZNF641Q96N77 438 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 AGPAT1Q99943 283 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SYT11Q9BT88 431 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 STRADBQ9C0K7 418 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 CYP4F12Q9HCS2 524 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SPATS2LQ9NUQ6 558 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 LRIT1Q9P2V4 623 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 PCDHGA4Q9Y5G9 962 aa15.52■□□□□ 0.08
CLSTN3-213ENST00000541953 SPTA1P02549 2419 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 A0A0U1RQS6 177 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 NVLO15381 856 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 FGF10O15520 208 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 WISP1O95388 367 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 ELFN1P0C7U0 828 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 CCL4P13236 92 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 NDST2P52849 883 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 USP53Q70EK8 1073 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 DTX1Q86Y01 620 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 MCOLN2Q8IZK6 566 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 RCBTB1Q8NDN9 531 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 TMEM74Q96NL1 305 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 TUBGCP5Q96RT8 1024 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 NUDT22Q9BRQ3 303 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 SNRNP25Q9BV90 132 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 HSD3B7Q9H2F3 369 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 DHX35Q9H5Z1 703 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 B4GALT6Q9UBX8 382 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 PCSK1NQ9UHG2 260 aa15.51■□□□□ 0.07
CLSTN3-213ENST00000541953 PRSS38A1L453 326 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 CACNB4O00305 520 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 EEF2KO00418 725 aaKnown RBP15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 TEX33O43247 280 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 PALMO75781 387 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 AK4P27144 223 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 SERPINA4P29622 427 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 TRIM23P36406 574 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 CSNK1DP48730 415 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 OR1D5P58170 312 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 CNGA3Q16281 694 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 CFAP58Q5T655 872 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 PHF19Q5T6S3 580 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 PGBD5Q8N414 524 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 COQ10AQ96MF6 247 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 SMIM14Q96QK8 99 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 DPEP2Q9H4A9 486 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 ATP13A3Q9H7F0 1226 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 STARD5Q9NSY2 213 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 MOSPD1Q9UJG1 213 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 PLEKHM1Q9Y4G2 1056 aa15.5■□□□□ 0.07
CLSTN3-213ENST00000541953 NBPF19A0A087WUL8 3843 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 LGALS16A8MUM7 142 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 DFFAO00273 331 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 TERTO14746 1132 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 TCF4P15884 667 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 ERCC2P18074 760 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 TNFAIP3P21580 790 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 LHCGRP22888 699 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 POLD2P49005 469 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 AIF1P55008 147 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 KCNC4Q03721 635 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 SLC10A7Q0GE19 358 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 GRM3Q14832 879 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 ACOX1Q15067 660 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 TBR1Q16650 682 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 AMZ1Q400G9 498 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 FKBP15Q5T1M5 1219 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 ACAD10Q6JQN1 1059 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 PNCKQ6P2M8 343 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 RFLNAQ6ZTI6 216 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 RFX8Q6ZV50 586 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 C17orf82Q86X59 251 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 NEK11Q8NG66 645 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 CINPQ9BW66 212 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-213ENST00000541953 WDR26Q9H7D7 661 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms