RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MARC1Q5VT66 337 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 CCNI2Q6ZMN8 369 aaPredicted RBP14.3□□□□□ -0.12
LTBR-209ENST00000541102 TMPRSS7Q7RTY8 843 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 ZC3H18Q86VM9 953 aaKnown RBP14.3□□□□□ -0.12
LTBR-209ENST00000541102 BBS5Q8N3I7 341 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 CCNYQ8ND76 341 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 ACTL9Q8TC94 416 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 PDCD6IPQ8WUM4 868 aaKnown RBP14.3□□□□□ -0.12
LTBR-209ENST00000541102 HDAC11Q96DB2 347 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 CEP41Q9BYV8 373 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 SCUBE2Q9NQ36 999 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 SMARCAL1Q9NZC9 954 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 JRKLQ9Y4A0 524 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 PCDHGC4Q9Y5F7 938 aa14.3□□□□□ -0.12
LTBR-209ENST00000541102 KNTC1P50748 2209 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 APOC4-APOC2K7ER74 178 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 RFPL3O75679 317 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 NEBLO76041 1014 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 APOC2P02655 101 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 CSF2P04141 144 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 JUNDP17535 347 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 CCNCP24863 283 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 HSPA9P38646 679 aaKnown RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 MMP12P39900 470 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 MMP13P45452 471 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 CLDN6P56747 220 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 PFN3P60673 137 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 GNG11P61952 73 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 HNRNPKP61978 463 aaKnown RBP eCLIP14.29□□□□□ -0.129e-7■■■■■ 27.6
LTBR-209ENST00000541102 POLR2LP62875 67 aaKnown RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 DAB2P98082 770 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 PPIDQ08752 370 aaKnown RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 ITKQ08881 620 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 LRRC14Q15048 493 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 NOMO1Q15155 1222 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 SIX1Q15475 284 aaPredicted RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 KCTD19Q17RG1 926 aaPredicted RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 WSCD2Q2TBF2 565 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 PARGQ86W56 976 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.29□□□□□ -0.12
LTBR-209ENST00000541102 CNTD1Q8N815 330 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 TP53I13Q8NBR0 393 aaPredicted RBP14.29□□□□□ -0.12
LTBR-209ENST00000541102 COG1Q8WTW3 980 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 ATG4AQ8WYN0 398 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 MAML1Q92585 1016 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 P3H4Q92791 437 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 ECHDC3Q96DC8 303 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 MS4A14Q96JA4 679 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 NUDCD1Q96RS6 583 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 NT5MQ9NPB1 228 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 GPR27Q9NS67 375 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 KLF15Q9UIH9 416 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 EFR3BQ9Y2G0 817 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 AKAP13Q12802 2813 aa14.29□□□□□ -0.12
LTBR-209ENST00000541102 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 NEMP2A6NFY4 417 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 H3BM21 787 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 TRAFD1O14545 582 aaPredicted RBP14.28□□□□□ -0.12
LTBR-209ENST00000541102 ZNF185O15231 689 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 MATN3O15232 486 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 C1SP09871 688 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 MYF5P13349 255 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 CCNB1P14635 433 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 NME1P15531 152 aaKnown RBP14.28□□□□□ -0.12
LTBR-209ENST00000541102 CKMT2P17540 419 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 ACADVLP49748 655 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 YPEL5P62699 121 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 AP1B1Q10567 949 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 EIF2B5Q13144 721 aaKnown RBP14.28□□□□□ -0.12
LTBR-209ENST00000541102 PTK2BQ14289 1009 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 PDK1Q15118 436 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 PROX2Q3B8N5 592 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 SLC13A5Q86YT5 568 aaPredicted RBP14.28□□□□□ -0.12
LTBR-209ENST00000541102 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 TEX26Q8N6G2 289 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 OR4C6Q8NH72 309 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 LMX1AQ8TE12 382 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 ZCCHC14Q8WYQ9 949 aaKnown RBP14.28□□□□□ -0.12
LTBR-209ENST00000541102 CARD9Q9H257 536 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 ZMIZ1Q9ULJ6 1067 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 PCDHGA1Q9Y5H4 931 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
LTBR-209ENST00000541102 TMEM8BA6NDV4 472 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 SCAMP1O15126 338 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 CEP104O60308 925 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 KRT37O76014 449 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 TJP3O95049 919 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 JCHAINP01591 159 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 PCCBP05166 539 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 HLA-DQB2P05538 268 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 ELFN1P0C7U0 828 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 GIMD1P0DJR0 217 aa14.27□□□□□ -0.13
LTBR-209ENST00000541102 ALPPL2P10696 532 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms