RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PTK6Q13882 451 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 TPSAB1Q15661 275 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 KCTD11Q693B1 232 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 PPP1R21Q6ZMI0 780 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 CTAGE6Q86UF2 777 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 NLRP8Q86W28 1048 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 CTAGE4Q8IX94 777 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 NRSN1Q8IZ57 195 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 C1QTNF2Q9BXJ5 285 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 SLC17A9Q9BYT1 436 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 RAB17Q9H0T7 212 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 UBP1Q9NZI7 540 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 GMEB2Q9UKD1 530 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 FRYLO94915 3013 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 ANKRD36A6QL64 1941 aa17.57■□□□□ 0.4
CLSTN3-210ENST00000540931 A0A1W2PQU0 124 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 C2orf81A6NN90 581 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 C10orf142B7Z368 130 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 LZTS3O60299 673 aaPredicted RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 LRP3O75074 770 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 GJB3O75712 270 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 HEXIM1O94992 359 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 FSBPO95073 299 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 METTL18O95568 372 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 CRTAMO95727 393 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 APRTP07741 180 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 HNRNPA2B1P22626 353 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 ADRA1AP35348 466 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 ADCY8P40145 1251 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 ABL2P42684 1182 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 MAGEA6P43360 314 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 DHPSP49366 369 aaPredicted RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 METAP1P53582 386 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 CREB5Q02930 508 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 GPS1Q13098 491 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 PUM1Q14671 1186 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 TEAD4Q15561 434 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 QPCTQ16769 361 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 TMEM259Q4ZIN3 620 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 GLE1Q53GS7 698 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 LIPIQ6XZB0 460 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 CYP2U1Q7Z449 544 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 IQCHQ86VS3 1027 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 DCP2Q8IU60 420 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 SYT12Q8IV01 421 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 KLHL7Q8IXQ5 586 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 RGL4Q8IZJ4 473 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 FAM160A2Q8N612 972 aaPredicted RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 PDCD7Q8N8D1 485 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 HSPA12BQ96MM6 686 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 ZFYVE1Q9HBF4 777 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 SMARCAL1Q9NZC9 954 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 PKD2L2Q9NZM6 624 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 B4GALT6Q9UBX8 382 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 ASIC3Q9UHC3 531 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 HS3ST3A1Q9Y663 406 aa17.56■□□□□ 0.4
CLSTN3-210ENST00000540931 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 PDE2AO00408 941 aaPredicted RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 RETP07949 1114 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 MLNP12872 115 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 BCKDHBP21953 392 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 HNF1BP35680 557 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 HMGCLP35914 325 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 LIG3P49916 1009 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 RACK1P63244 317 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 ZNF765Q7L2R6 523 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 NLRP9Q7RTR0 991 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 HOOK3Q86VS8 718 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 ZSWIM9Q86XI8 627 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 TMEFF1Q8IYR6 380 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 GPR161Q8N6U8 529 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 DNAAF3Q8N9W5 541 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 DTX3LQ8TDB6 740 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 RUBCNQ92622 972 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 BIRC7Q96CA5 298 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 KRT12Q99456 494 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 FICDQ9BVA6 458 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 GPR63Q9BZJ6 419 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 C6orf106Q9H6K1 298 aaPredicted RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 XAB2Q9HCS7 855 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 DLL3Q9NYJ7 618 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 SMG5Q9UPR3 1016 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 INVSQ9Y283 1065 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 UTP11Q9Y3A2 253 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 NEU2Q9Y3R4 380 aa17.55■□□□□ 0.4
CLSTN3-210ENST00000540931 TPRP12270 2363 aaKnown RBP17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 EPG5Q9HCE0 2579 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 CACNA1BQ00975 2339 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 C1orf232A0A0U1RR37 186 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 PLK4O00444 970 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 WNT9AO14904 365 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 EPN2O95208 641 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 NPY2RP49146 381 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 STAT4Q14765 748 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 PPIL6Q8IXY8 311 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 DCLK2Q8N568 766 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms