RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CYP4V2Q6ZWL3 525 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CADM3Q8N126 398 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZNF786Q8N393 782 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TMEM130Q8N3G9 435 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PCDH19Q8TAB3 1148 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 FAR2Q96K12 515 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GPR20Q99678 358 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 NPAS2Q99743 824 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ACO2Q99798 780 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CIB1Q99828 191 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CPNE1Q99829 537 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MTG1Q9BT17 334 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 GATA5Q9BWX5 397 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 RAB6CQ9H0N0 254 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MIR1-1HGQ9H1L0 117 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 NCKIPSDQ9NZQ3 722 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MORF4L1Q9UBU8 362 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 SLC25A13Q9UJS0 675 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 BOLA1Q9Y3E2 137 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 RIF1Q5UIP0 2472 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 EVPLQ92817 2033 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GLTPD2A6NH11 291 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 AQP9O43315 295 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 LZTS3O60299 673 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 MSCO60682 206 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MICAL2O94851 1124 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZNF182P17025 639 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 TTKP33981 857 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 SPRP35270 261 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 GRIA3P42263 894 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 RPL14P50914 215 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 BMXP51813 675 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PSME3P61289 254 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 IFITM2Q01629 132 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PPIL2Q13356 520 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 DDX39BQ13838 428 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CRY1Q16526 586 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PHKG1Q16816 387 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 BOLA3Q53S33 107 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 OVOS1Q6IE37 1185 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 NIPAL1Q6NVV3 410 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TAPT1Q6NXT6 567 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZBTB49Q6ZSB9 765 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TFAP2DQ7Z6R9 452 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 HERC6Q8IVU3 1022 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ATPAF2Q8N5M1 289 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZNF420Q8TAQ5 688 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 TOP1MTQ969P6 601 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 DACT3Q96B18 629 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 MARK4Q96L34 752 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 SLC29A1Q99808 456 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 OSGEPL1Q9H4B0 414 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZNF385DQ9H6B1 395 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZBTB26Q9HCK0 441 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PTPRHQ9HD43 1115 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PDGFCQ9NRA1 345 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 UBP1Q9NZI7 540 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TRPM5Q9NZQ8 1165 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PTBP2Q9UKA9 531 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 FBXL21Q9UKT6 434 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 RP1P56715 2156 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CNOT1A5YKK6 2376 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 HEATR9A2RTY3 570 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 C2CD4BA6NLJ0 364 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 FAM155AB1AL88 458 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 C9IYK1 514 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 G3V2L1 256 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MEN1O00255 615 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CBX4O00257 560 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 EEF2KO00418 725 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 TOR1BO14657 336 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PIGNO95427 931 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 MPOP05164 745 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CHRNGP07510 517 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 GNAO1P09471 354 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CYP2F1P24903 491 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 YAP1P46937 504 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 RFX3P48380 749 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 RHDQ02161 417 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PTPN11Q06124 597 aaPredicted RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CAPSQ13938 189 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TRIM25Q14258 630 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 MFSD10Q14728 455 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 NR1D2Q14995 579 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CCDC58Q4VC31 144 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ARHGAP15Q53QZ3 475 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TMEM198Q66K66 360 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 HEATR4Q86WZ0 1026 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 CARNMT1Q8N4J0 409 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TTC39CQ8N584 583 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 TBC1D15Q8TC07 691 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 CD99L2Q8TCZ2 262 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 BLOC1S5Q8TDH9 187 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZC3H15Q8WU90 426 aaKnown RBP5.25□□□□□ -1.57
PROM1-220ENST00000540805 PTPN18Q99952 460 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 ZNF670Q9BS34 389 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 NAT9Q9BTE0 207 aa5.25□□□□□ -1.57
PROM1-220ENST00000540805 SNRNP25Q9BV90 132 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms