RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 GGT7Q9UJ14 662 aa10.43□□□□□ -0.74
CDCA3-208ENST00000540683 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
CDCA3-208ENST00000540683 ARID1BQ8NFD5 2236 aaPredicted RBP10.43□□□□□ -0.74
CDCA3-208ENST00000540683 A0A087WV48 116 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 CPED1A4D0V7 1026 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 FAM149AA5PLN7 773 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 TRAFD1O14545 582 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 MATN3O15232 486 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 SPINT1O43278 529 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 BUB1BO60566 1050 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ZNF189O75820 626 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 RECQL5O94762 991 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 IPO7O95373 1038 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 CAPNS1P04632 268 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 RBMS1P29558 406 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 TRIM23P36406 574 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 GARSP41250 739 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ABCG1P45844 678 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ADKP55263 362 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ERVPABLB-1P60509 514 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 SLC10A7Q0GE19 358 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 GALNT2Q10471 571 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 EIF2B5Q13144 721 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 WSCD2Q2TBF2 565 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ZNF542PQ5EBM4 170 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ENPP7Q6UWV6 458 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ARL14Q8N4G2 192 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 TEX26Q8N6G2 289 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 TMEM159Q96B96 161 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 NUS1Q96E22 293 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 SCRN2Q96FV2 425 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 STRADBQ9C0K7 418 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 CDH19Q9H159 772 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 POLR1BQ9H9Y6 1135 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 RAD18Q9NS91 495 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 AKAP7Q9P0M2 348 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 PADI4Q9UM07 663 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ZZEF1O43149 2961 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 DSPP15924 2871 aaKnown RBP10.42□□□□□ -0.74
CDCA3-208ENST00000540683 PKD1L2Q7Z442 2459 aa10.42□□□□□ -0.74
CDCA3-208ENST00000540683 ASPMQ8IZT6 3477 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 ANKRD36A6QL64 1941 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 RGSL1A5PLK6 1076 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 EIF4E1BA6NMX2 242 aaKnown RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 RNF103O00237 685 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PCCBP05166 539 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CCNB1P14635 433 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PNLIPP16233 465 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CR2P20023 1033 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 IL1R2P27930 398 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 LSSP48449 732 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PCBP4P57723 403 aaKnown RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 SEMG2Q02383 582 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 DPTQ07507 201 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 ILF3Q12906 894 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 BIRC2Q13490 618 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 SPIDRQ14159 915 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PDK1Q15118 436 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 SPA17Q15506 151 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CLPPQ16740 277 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 DEFB133Q30KQ1 61 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 ANKRD20A8PQ5CZ79 823 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 LRRC73Q5JTD7 316 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CDCP2Q5VXM1 449 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PNCKQ6P2M8 343 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 KDM7AQ6ZMT4 941 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 EFL1Q7Z2Z2 1120 aaKnown RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 TAF8Q7Z7C8 310 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 NLRP8Q86W28 1048 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 NRSN1Q8IZ57 195 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 ZNF248Q8NDW4 579 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CCHCR1Q8TD31 782 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 TMEM74Q96NL1 305 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 RBM15Q96T37 977 aaKnown RBP eCLIP10.41□□□□□ -0.746e-7■■□□□ 12.6
CDCA3-208ENST00000540683 LRRC61Q9BV99 259 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 GSDMCQ9BYG8 508 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 NOD2Q9HC29 1040 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 MBNL1Q9NR56 388 aaKnown RBP10.41□□□□□ -0.74
CDCA3-208ENST00000540683 ABHD10Q9NUJ1 306 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 B4GALT6Q9UBX8 382 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 GPR34Q9UPC5 381 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 PPIL1Q9Y3C6 166 aa10.41□□□□□ -0.74
CDCA3-208ENST00000540683 CAPN8A6NHC0 703 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 AKR1B15C9JRZ8 316 aaPredicted RBP10.4□□□□□ -0.74
CDCA3-208ENST00000540683 YY2O15391 372 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 MTSS1O43312 755 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 MFAP3LO75121 409 aa10.4□□□□□ -0.74
CDCA3-208ENST00000540683 CSO75390 466 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms