RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FAM92AA1XBS5 289 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CCDC154A6NI56 674 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TBX10O75333 385 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ITGB3P05106 788 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CHRNB1P11230 501 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 OGNP20774 298 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 GPD1P21695 349 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 WARSP23381 471 aaKnown RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AKAP5P24588 427 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 CENPAP49450 140 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF143P52747 638 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-214ENST00000540109 AIF1P55008 147 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 WDR72Q3MJ13 1102 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 SEL1L3Q68CR1 1132 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 TAF8Q7Z7C8 310 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 GALNT12Q8IXK2 581 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 STARD8Q92502 1023 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RNF34Q969K3 372 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 RACGAP1Q9H0H5 632 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 C1orf21Q9H246 121 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 NUP50Q9UKX7 468 aa6.08□□□□□ -1.44
PTPRD-214ENST00000540109 LACTBL1A8MY62 500 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 B8ZZF3 427 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 APOC4-APOC2K7ER74 178 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TSPAN1O60635 241 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TRIM13O60858 407 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 EDF1O60869 148 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 APOC2P02655 101 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 PDGFRAP16234 1089 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ATP6V1B2P21281 511 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 VARSP26640 1264 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MSX2P35548 267 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MARCKSL1P49006 195 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CLCN3P51790 818 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CYP4F2P78329 520 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TNK2Q07912 1038 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CYP4F3Q08477 520 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ZIK1Q3SY52 487 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ZBED5Q49AG3 693 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 SPRYD7Q5W111 196 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ANGPTL8Q6UXH0 198 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ASCC1Q8N9N2 400 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CCNYQ8ND76 341 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 C15orf40Q8WUR7 153 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MYDGFQ969H8 173 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TNIP3Q96KP6 325 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 SNX27Q96L92 541 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 RDH12Q96NR8 316 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MCEEQ96PE7 176 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CADM1Q9BY67 442 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CXorf21Q9HAI6 301 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 C2orf71A6NGG8 1288 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 FOXO6A8MYZ6 492 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 H0Y858 1186 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 M0QZ92 97 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 KCNK1O00180 336 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MZF1P28698 734 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 HARS2P49590 506 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 NFE2L1Q14494 772 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 DENND5BQ6ZUT9 1274 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 SLC22A9Q8IVM8 553 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 C8orf59Q8N0T1 100 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 PQLC1Q8N2U9 271 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CAMKK1Q8N5S9 505 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 C7orf26Q96N11 449 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 RUBCNLQ9H714 662 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 DDX43Q9NXZ2 648 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TRIM38O00635 465 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 F2P00734 622 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 POU1F1P28069 291 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MAPK1P28482 360 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TRIM23P36406 574 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 TNFSF9P41273 254 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CYP4F8P98187 520 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MAP2K5Q13163 448 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 FAM98BQ52LJ0 330 aaKnown RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CATSPER4Q7RTX7 472 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CHSY1Q86X52 802 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 RHBDF1Q96CC6 855 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 SEPHS2Q99611 448 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 C16orf70Q9BSU1 422 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 NEUROG2Q9H2A3 272 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CYP4F12Q9HCS2 524 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 ADPRHL2Q9NX46 363 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 COX16Q9P0S2 106 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CNTN3Q9P232 1028 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 NDUFAF1Q9Y375 327 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 A0A087WZ62 844 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 FUOMA2VDF0 154 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MBLAC1A4D2B0 266 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-214ENST00000540109 FAM25EA8MYX2 175 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 M0QYV0 167 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 PRMT3O60678 531 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 FAM20BO75063 409 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 MPOP05164 745 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 CXCL8P10145 99 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 SLC26A3P40879 764 aa6.07□□□□□ -1.44
PTPRD-214ENST00000540109 PIK3CBP42338 1070 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms