RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 RGRP47804 291 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 CDH6P55285 790 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 VAC14Q08AM6 782 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 KRT81Q14533 505 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 ARHGAP40Q5TG30 622 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 LIPIQ6XZB0 460 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 USP45Q70EL2 814 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 JAMLQ86YT9 394 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 ARHGAP12Q8IWW6 846 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 FBXO39Q8N4B4 442 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 NPWQ8N729 165 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 FAM46DQ8NEK8 389 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 TMEM159Q96B96 161 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 NUS1Q96E22 293 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 DPEP2Q9H4A9 486 aa15.35■□□□□ 0.05
UBE3B-211ENST00000539843 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.35■□□□□ 0.05
UBE3B-211ENST00000539843 PNMA8BQ9ULN7 279 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-211ENST00000539843 IGSF10Q6WRI0 2623 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 ASXL3Q9C0F0 2248 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 A0A1B0GTH6 734 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 B4DGG1 531 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 D6RAR5 112 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 NTN3O00634 580 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-211ENST00000539843 PLD2O14939 933 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 PNLIPP16233 465 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 VIPR1P32241 457 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
UBE3B-211ENST00000539843 ILF3Q12906 894 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE3B-211ENST00000539843 DPYSQ14117 519 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 DPYSL2Q16555 572 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
UBE3B-211ENST00000539843 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 MARC1Q5VT66 337 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 CCDC81Q6ZN84 652 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 RAB11FIP2Q7L804 512 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 ZSWIM9Q86XI8 627 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 CCNJLQ8IV13 435 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 FUBP1Q96AE4 644 aaKnown RBP15.34■□□□□ 0.05
UBE3B-211ENST00000539843 WBP1Q96G27 269 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 NUDCD1Q96RS6 583 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 GSDMCQ9BYG8 508 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 LRRN3Q9H3W5 708 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 IP6K2Q9UHH9 426 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 PHTF1Q9UMS5 762 aa15.34■□□□□ 0.05
UBE3B-211ENST00000539843 PSMD11O00231 422 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.041e-7■■■□□ 18.1
UBE3B-211ENST00000539843 TRAFD1O14545 582 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-211ENST00000539843 MYCLP1P12525 358 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CA4P22748 312 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CCKBRP32239 447 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 MMP13P45452 471 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CFHR1Q03591 330 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 SLC10A7Q0GE19 358 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 RALGDSQ12967 914 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 ZSCAN23Q3MJ62 389 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 C14orf28Q4W4Y0 310 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 FIGNQ5HY92 759 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 ARMC12Q5T9G4 340 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 DENND2CQ68D51 928 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CAVIN1Q6NZI2 390 aaKnown RBP15.33■□□□□ 0.04
UBE3B-211ENST00000539843 PNCKQ6P2M8 343 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 ARHGAP36Q6ZRI8 547 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CLEC14AQ86T13 490 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 ZNF605Q86T29 641 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 LRRC49Q8IUZ0 686 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 ARFGAP1Q8N6T3 406 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 PLA2G15Q8NCC3 412 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 GPR156Q8NFN8 814 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 TEKT4Q8WW24 435 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 OR1E3Q8WZA6 343 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 SPOCK2Q92563 424 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CMKLR1Q99788 373 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 TRIM7Q9C029 511 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CARS2Q9HA77 564 aaKnown RBP15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CPNE5Q9HCH3 593 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 B4GALT6Q9UBX8 382 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 APPL1Q9UKG1 709 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 PCDHGA7Q9Y5G6 932 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 PTPRQQ9UMZ3 2332 aa15.33■□□□□ 0.04
UBE3B-211ENST00000539843 CELSR3Q9NYQ7 3312 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 PRSS38A1L453 326 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 TMEM202A6NGA9 273 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 A8MX80 341 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 CDRT15L2A8MXV6 281 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 NUDT21O43809 227 aaKnown RBP15.32■□□□□ 0.04
UBE3B-211ENST00000539843 PYGLP06737 847 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 TRIM23P36406 574 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 CCL7P80098 99 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 CERCAMQ5T4B2 595 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 RAET1GQ6H3X3 334 aa15.32■□□□□ 0.04
UBE3B-211ENST00000539843 POLNQ7Z5Q5 900 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms