RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ASTE1Q2TB18 679 aaPredicted RBP19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ANKRD20A8PQ5CZ79 823 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ZFYVE27Q5T4F4 411 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PELI3Q8N2H9 469 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ATL2Q8NHH9 583 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LRRN4Q8WUT4 740 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GLMNQ92990 594 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ZNHIT6Q9NWK9 470 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GULP1Q9UBP9 304 aa19.12■□□□□ 0.65
TNFRSF1A-212ENST00000539372 A0A087WV48 116 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TMEM202A6NGA9 273 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CACNB4O00305 520 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CASC3O15234 703 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 AKR1B10O60218 316 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ALPIP09923 528 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 VIPR1P32241 457 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GARSP41250 739 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GALNT2Q10471 571 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PAFAH1B3Q15102 231 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ESRP1Q6NXG1 681 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 VSTM4Q8IW00 320 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 KYQ8NBH2 561 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 OR1E3Q8WZA6 343 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SPOCK2Q92563 424 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 COQ10AQ96MF6 247 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CHP1Q99653 195 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 FGF22Q9HCT0 170 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 MRPL40Q9NQ50 206 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PADI4Q9UM07 663 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PHTF1Q9UMS5 762 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SHROOM3Q8TF72 1996 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ZFYVE26Q68DK2 2539 aa19.11■□□□□ 0.65
TNFRSF1A-212ENST00000539372 A0A1W2PQ67 120 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SSU72P8A0A1W2PR75 194 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 USP12O75317 370 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 HEXIM1O94992 359 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PGLSO95336 258 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TNFP01375 233 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 MPOP05164 745 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 KRT7P08729 469 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TMEM253P0C7T8 217 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CTPS1P17812 591 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 KIAA1024LP59773 190 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 MESDQ14696 234 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PDK2Q15119 407 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TSR1Q2NL82 804 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ARMC12Q5T9G4 340 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PNCKQ6P2M8 343 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 HSD11B1LQ7Z5J1 315 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PDZD3Q86UT5 571 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LRRC49Q8IUZ0 686 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TEX26Q8N6G2 289 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 OR56A4Q8NGH8 313 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SCG3Q8WXD2 468 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 NUS1Q96E22 293 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CRELD1Q96HD1 420 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SEMA3CQ99985 751 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ZNF670Q9BS34 389 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LGR4Q9BXB1 951 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 WDR26Q9H7D7 661 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ABHD10Q9NUJ1 306 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SPTLC3Q9NUV7 552 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 MOSPD1Q9UJG1 213 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GPR34Q9UPC5 381 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TTLL3Q9Y4R7 772 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 RAI2Q9Y5P3 530 aa19.1■□□□□ 0.65
TNFRSF1A-212ENST00000539372 A0A0U1RQS6 177 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 NPIPB15A6NHN6 443 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TPM1P09493 284 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CYP2A6P11509 494 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LHCGRP22888 699 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ITPKBP27987 946 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ETV3P41162 512 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GBE1Q04446 702 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 RALGPS1Q5JS13 557 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 TSPAN33Q86UF1 283 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GKN2Q86XP6 184 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 MAP7D3Q8IWC1 876 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 PQLC3Q8N755 202 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ARL10Q8N8L6 244 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 RAPGEF5Q92565 580 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 NAT6Q93015 286 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SMIM14Q96QK8 99 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 CCDC3Q9BQI4 270 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 SYNDIG1Q9H7V2 258 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 DGKBQ9Y6T7 804 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 ASXL3Q9C0F0 2248 aa19.09■□□□□ 0.65
TNFRSF1A-212ENST00000539372 LRP4O75096 1905 aa19.08■□□□□ 0.65
TNFRSF1A-212ENST00000539372 GOLGA6CA6NDK9 693 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GOLGA6BA6NDN3 693 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 MATN3O15232 486 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 MFAP3LO75121 409 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PDHA1P08559 390 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GOLGA6DP0CG33 693 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 NFKBIAP25963 317 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 MAN1A1P33908 653 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 ACTN2P35609 894 aa19.08■□□□□ 0.64
TNFRSF1A-212ENST00000539372 TRIM23P36406 574 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms