RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 A0A1W2PPM1 405 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 F8W810 466 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 MAP2K7O14733 419 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 FIBPO43427 364 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 PEX1O43933 1283 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 KRT36O76013 467 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 CNTN5O94779 1100 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 APRTP07741 180 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 C6P13671 934 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 EPHB2P29323 1055 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 RYKP34925 604 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 FRKP42685 505 aaPredicted RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 CLK1P49759 484 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SUOXP51687 545 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 BRWD1-AS2P59051 145 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 RPS3AP61247 264 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 STX1BP61266 288 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 UFM1P61960 85 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 WDR5P61964 334 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SIM1P81133 766 aaPredicted RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 MRPS5P82675 430 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 MFSD13AQ14CX5 517 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 PGM5Q15124 567 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 GPR68Q15743 365 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SOWAHAQ2M3V2 549 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 PROSER3Q2NL68 480 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 MYLK3Q32MK0 819 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SYTL3Q4VX76 610 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 METTL11BQ5VVY1 283 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 ANKRD54Q6NXT1 300 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 METTL2BQ6P1Q9 378 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 IKBIPQ70UQ0 350 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 RRM2BQ7LG56 351 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 PHC2Q8IXK0 858 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC13Q8IYE1 715 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 DCP1BQ8IZD4 617 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 GUF1Q8N442 669 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SRBD1Q8N5C6 995 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 AMER3Q8N944 861 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SCAIQ8N9R8 606 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM116Q8NCL8 245 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 EXD1Q8NHP7 514 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 USP6NLQ92738 828 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SNX21Q969T3 373 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 FBXL8Q96CD0 374 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 FAM120BQ96EK7 910 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 REXO5Q96IC2 774 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 METTL2AQ96IZ6 378 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SGK494Q96LW2 274 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC17Q96LX7 622 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 TXLNGYQ9BZA5 131 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 PDZD7Q9H5P4 517 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 CHCHD3Q9NX63 227 aaKnown RBP1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SPHK1Q9NYA1 384 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 BAG5Q9UL15 447 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 GRIP1Q9Y3R0 1128 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 SESN1Q9Y6P5 492 aa1.09□□□□□ -2.24
HIF1A-204ENST00000539097 FRMD3A2A2Y4 597 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 OR6C68A6NDL8 312 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 OOEPA6NGQ2 149 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 DDTLA6NHG4 134 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TSPY2A6NKD2 308 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 C19orf81C9J6K1 198 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CLIC1O00299 241 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ANGPT2O15123 496 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MITFO75030 526 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PRDM1O75626 825 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PSMD10O75832 226 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PNPP00491 289 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SERPINC1P01008 464 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ADRB1P08588 477 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TSPY3P0CV98 308 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TSPY8P0CW00 308 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 NR2F6P10588 404 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 AKR1A1P14550 325 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RPS2P15880 293 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ST6GAL1P15907 406 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 UBA1P22314 1058 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CBLP22681 906 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TNFRSF8P28908 595 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CDC25CP30307 473 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TTKP33981 857 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 EIF2S3P41091 472 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 COPB1P53618 953 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CTSWP56202 376 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SEC61A1P61619 476 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RPP38P78345 283 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MRPS35P82673 323 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TSPY1Q01534 308 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RHAGQ02094 409 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SLC18A3Q16572 532 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 KYNUQ16719 465 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MEP1AQ16819 746 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TIGD2Q4W5G0 525 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 KIAA1755Q5JYT7 1200 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 Q5PR19 223 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GARNL3Q5VVW2 1013 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 NAPRTQ6XQN6 538 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GLDNQ6ZMI3 551 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LINC00696Q6ZRV3 163 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms