RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 H7C4K7 107 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 ENPP3O14638 875 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 CASQ2O14958 399 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 MAP3K7O43318 606 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 RAMP2O60895 175 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 S1PR4O95977 384 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FGF1P05230 155 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 RBP1P09455 135 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 SELPP16109 830 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 HLA-DPA1P20036 260 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TACR2P21452 398 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 SAT1P21673 171 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FDXRP22570 491 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 SP100P23497 879 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 HOXD9P28356 352 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 PPARGP37231 505 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 SLC11A1P49279 550 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 ARSDP51689 593 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 SESN3P58005 492 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 MAXP61244 160 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 WDR5P61964 334 aaKnown RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 MRPS35P82673 323 aaKnown RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 NFKB2Q00653 900 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 SULT2A1Q06520 285 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TBL3Q12788 808 aaKnown RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 TAF10Q12962 218 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 LAMB3Q13751 1172 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 RFTN1Q14699 578 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 POLD3Q15054 466 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 ACAP2Q15057 778 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 PCSK7Q16549 785 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 GSTA3Q16772 222 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 AGAP9Q5VTM2 703 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FAM171A1Q5VUB5 890 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FAM45BPQ6NSW5 357 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FUT10Q6P4F1 479 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 RSPO2Q6UXX9 243 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 RNF111Q6ZNA4 994 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 LRRC8DQ7L1W4 858 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TFAP2DQ7Z6R9 452 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 DEFB107AQ8IZN7 70 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 KIRREL3Q8IZU9 778 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FBXW8Q8N3Y1 598 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDB1-211ENST00000538280 SLC25A41Q8N5S1 370 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 GPATCH11Q8N954 259 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 ATAD1Q8NBU5 361 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FAM45AQ8TCE6 357 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 DTX3LQ8TDB6 740 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 L3HYPDHQ96EM0 354 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 MOCOSQ96EN8 888 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 MYEOVQ96EZ4 313 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 FAR2Q96K12 515 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TRIB3Q96RU7 358 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 OSBPL1AQ9BXW6 950 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 SEZ6LQ9BYH1 1024 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 POMKQ9H5K3 350 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 WDR55Q9H6Y2 383 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 POPDC3Q9HBV1 291 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TRPC7Q9HCX4 862 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 MAN1C1Q9NR34 630 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 NDE1Q9NXR1 346 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 NCKIPSDQ9NZQ3 722 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 UXTQ9UBK9 157 aaPredicted RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 POMPQ9Y244 141 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
DDB1-211ENST00000538280 MUC6Q6W4X9 2439 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 KIAA1671Q9BY89 1806 aa9.28□□□□□ -0.92
DDB1-211ENST00000538280 TRPC5OSA6NMA1 111 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 SLC38A8A6NNN8 435 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 H3BNC9 293 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 MUSKO15146 869 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 NBNO60934 754 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 TBX18O95935 607 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 JUNP05412 331 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 IL9P15248 144 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 OGNP20774 298 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 EPHA3P29320 983 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 ACVRL1P37023 503 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 SLC12A2P55011 1212 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 RPL26P61254 145 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 XIAPP98170 497 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 ELAVL2Q12926 359 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 FAM83EQ2M2I3 478 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 AAK1Q2M2I8 961 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 TYSND1Q2T9J0 566 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 TMEM31Q5JXX7 168 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 C10orf120Q5SQS8 335 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 ZNF549Q6P9A3 640 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 C16orf89Q6UX73 402 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 TRIM67Q6ZTA4 783 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 DHDDSQ86SQ9 333 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 SNX32Q86XE0 403 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 SLC22A9Q8IVM8 553 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 APLFQ8IW19 511 aaPredicted RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 RNF168Q8IYW5 571 aaPredicted RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 PGAM4Q8N0Y7 254 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms