RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ADAMTS17Q8TE56 1095 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 FAM172AQ8WUF8 416 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 RXFP2Q8WXD0 754 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 RSAD2Q8WXG1 361 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 FGF14Q92915 247 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ATP2A3Q93084 1043 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 EXOC4Q96A65 974 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 OTUB2Q96DC9 234 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 BTN2A3PQ96KV6 586 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TUBGCP5Q96RT8 1024 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TBCBQ99426 244 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 NPY6RQ99463 290 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DESI2Q9BSY9 194 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DDX23Q9BUQ8 820 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 PACSIN1Q9BY11 444 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DCLK3Q9C098 648 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM168Q9H0V1 697 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 WDCPQ9H6R7 721 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 IFT22Q9H7X7 185 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 GKN1Q9NS71 199 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DUS2Q9NX74 493 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 PSD3Q9NYI0 1048 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 NENFQ9UMX5 172 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 SORCS3Q9UPU3 1222 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 WNT6Q9Y6F9 365 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DOCK8Q8NF50 2099 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 A0A0A6YYK5 440 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 MACROD2A1Z1Q3 448 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM191CA6NGB0 347 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 KCNU1A8MYU2 1149 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 F5H5T6 163 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 NEMP1O14524 444 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CHADO15335 359 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SPOPO43791 374 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 LATS1O95835 1130 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 IGLV3-25P01717 112 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 IGLV3-27P01718 113 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 FYNP06241 537 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TUBBP07437 444 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 IVLP07476 585 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CPEP16870 476 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 GJC1P36383 396 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ARHGAP25P42331 645 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ID4P47928 161 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 LSSP48449 732 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CXCR3P49682 368 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 HNRNPH2P55795 449 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 HDAC4P56524 1084 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 PITX1P78337 314 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ALDH6A1Q02252 535 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 FCHO2Q0JRZ9 810 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 MESDQ14696 234 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ACAP1Q15027 740 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 HADHQ16836 314 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 WHAMMP3Q1A5X7 153 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 C15orf59Q2T9L4 293 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ANO4Q32M45 955 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ITPRIPL2Q3MIP1 535 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC14Q49A88 953 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ATP13A4Q4VNC1 1196 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ODF2Q5BJF6 829 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TRNP1Q6NT89 227 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 LRRC31Q6UY01 552 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 LEKR1Q6ZMV7 388 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TPGS1Q6ZTW0 290 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 HTR3DQ70Z44 454 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CXXC5Q7LFL8 322 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 STRADAQ7RTN6 431 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SLFN11Q7Z7L1 901 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 FAM124AQ86V42 546 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 CHSY1Q86X52 802 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 BBS7Q8IWZ6 715 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 UBALD2Q8IYN6 164 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SLC44A3Q8N4M1 653 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 NIPA2Q8N8Q9 360 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 HJURPQ8NCD3 748 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ACRBPQ8NEB7 543 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 NUDT10Q8NFP7 164 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SLC35G2Q8TBE7 412 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ZCCHC14Q8WYQ9 949 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 DNASE1L2Q92874 299 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 NT5C3BQ969T7 300 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ARHGEF26Q96DR7 871 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 PGAP3Q96FM1 320 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 NUDT11Q96G61 164 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 LCORQ96JN0 433 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ZFYVE19Q96K21 471 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ALS2CR12Q96Q35 445 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 WDR24Q96S15 920 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 RPP25Q9BUL9 199 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 BBS2Q9BXC9 721 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TRIM7Q9C029 511 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms