RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 KRT35Q92764 455 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 TSACCQ96A04 125 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 LACRTQ9GZZ8 138 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 DDX56Q9NY93 547 aaKnown RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 CEP295Q9C0D2 2601 aa14.31□□□□□ -0.12
UBE3B-206ENST00000536398 COL5A1P20908 1838 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-206ENST00000536398 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-206ENST00000536398 LY6G6EA0A0G2JKS1 128 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 A0A0U1RQJ8 604 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 AQP9O43315 295 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 RFPL3O75679 317 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 HEXIM1O94992 359 aaKnown RBP14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PRLP01236 227 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PROS1P07225 676 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-206ENST00000536398 HNF1BP35680 557 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 ETV3P41162 512 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PTK2BQ14289 1009 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 NFATC4Q14934 902 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 SMAD1Q15797 465 aaKnown RBP14.3□□□□□ -0.12
UBE3B-206ENST00000536398 ST3GAL2Q16842 350 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 ALG11Q2TAA5 492 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 ODF2Q5BJF6 829 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 FAXCQ5TGI0 409 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 KAZNQ674X7 775 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 ALG1LQ6GMV1 187 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 MACC1Q6ZN28 852 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 RD3Q7Z3Z2 195 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 VSIG1Q86XK7 387 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 TPCN2Q8NHX9 752 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 SCRN2Q96FV2 425 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 APOLD1Q96LR9 279 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 OLFM3Q96PB7 478 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 CLPBQ9H078 707 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PCDHGA1Q9Y5H4 931 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 U3KQA8 63 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 PLXNB3Q9ULL4 1909 aa14.3□□□□□ -0.12
UBE3B-206ENST00000536398 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 TMEM202A6NGA9 273 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 H3BM21 787 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 PSTPIP1O43586 416 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 CST8O60676 142 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 CYP2A6P11509 494 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 ACP1P24666 158 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 CD86P42081 329 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 PEX5P50542 639 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 IFI35P80217 286 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 PPARDQ03181 441 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 MTM1Q13496 603 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 HID1Q8IV36 788 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 AGAP3Q96P47 875 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 MCCC1Q96RQ3 725 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 BAG1Q99933 345 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 LRRC61Q9BV99 259 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 TDRD1Q9BXT4 1180 aaKnown RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 MRPL40Q9NQ50 206 aaKnown RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 NLGN3Q9NZ94 848 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 SEPT10Q9P0V9 454 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 SPASTQ9UBP0 616 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 APOBEC3BQ9UH17 382 aaKnown RBP14.29□□□□□ -0.12
UBE3B-206ENST00000536398 PPIL1Q9Y3C6 166 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 FREM2Q5SZK8 3169 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 PTPRBP23467 1997 aa14.29□□□□□ -0.12
UBE3B-206ENST00000536398 NEMP2A6NFY4 417 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 TOR1BO14657 336 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 YY2O15391 372 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 TSHRP16473 764 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 ZFXP17010 805 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-206ENST00000536398 CES1P23141 567 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 SRP54P61011 504 aaKnown RBP14.28□□□□□ -0.12
UBE3B-206ENST00000536398 SKOR1P84550 965 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 DAB2P98082 770 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 PTSQ03393 145 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 PDK1Q15118 436 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 C11orf63Q6NUN7 778 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 PNCKQ6P2M8 343 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 Q6ZVL8 140 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 KATNAL2Q8IYT4 538 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 LPCAT1Q8NF37 534 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 BTN2A2Q8WVV5 523 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 OR1E3Q8WZA6 343 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 NUS1Q96E22 293 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 PDXPQ96GD0 296 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 HERPUD2Q9BSE4 406 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 FGF22Q9HCT0 170 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 TRIM10Q9UDY6 481 aa14.28□□□□□ -0.12
UBE3B-206ENST00000536398 AMACRQ9UHK6 382 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms