RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ZNF598Q86UK7 904 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 SATL1Q86VE3 508 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 CLYBLQ8N0X4 340 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ATP6V0D2Q8N8Y2 350 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ARRDC2Q8TBH0 407 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 NAT14Q8WUY8 206 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 DUS3LQ96G46 650 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ZCWPW1Q9H0M4 648 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 CD300AQ9UGN4 299 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 LZTS1Q9Y250 596 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 FGF4P08620 206 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 SMIM18P0DKX4 95 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF26P17031 533 aaPredicted RBP16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 PBX3P40426 434 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ACVR1Q04771 509 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 CYHR1Q6ZMK1 362 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF696Q9H7X3 374 aa16.07■□□□□ 0.16
CHMP1A-202ENST00000535997 TFAP2AP05549 437 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 ATXN1LP0C7T5 689 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 IL10RBQ08334 325 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 DDR2Q16832 855 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 UGT3A2Q3SY77 523 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 SAMD4BQ5PRF9 694 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 LDB1Q86U70 411 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 GALNT4Q8N4A0 578 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 PNPLA1Q8N8W4 532 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 GPR150Q8NGU9 434 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 EME1Q96AY2 570 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 ZFRQ96KR1 1074 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 RGS18Q9NS28 235 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 TMEM181Q9P2C4 612 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 MARCH4Q9P2E8 410 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 CROTQ9UKG9 612 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 CRYL1Q9Y2S2 319 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 PRORSD1PA6NEY8 169 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 MANSC4A6NHS7 340 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 MRASO14807 208 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 PGM3O95394 542 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 GLP2RO95838 553 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 EPOP01588 193 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 USP46P62068 366 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 NKX3-2P78367 333 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 CREB5Q02930 508 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 POLD3Q15054 466 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 MGAT5BQ3V5L5 792 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 UNC50Q53HI1 259 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 C8orf82Q6P1X6 216 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 ZNF354CQ86Y25 554 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 LPGAT1Q92604 370 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 ROPN1LQ96C74 230 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 CNBD2Q96M20 576 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 TLL2Q9Y6L7 1015 aa16.06■□□□□ 0.16
CHMP1A-202ENST00000535997 TCRBV3S1A0A5B6 114 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 DRGXA6NNA5 263 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 TRPA1O75762 1119 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 FAM58BPP0C7Q3 252 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CYBAP13498 195 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CD1DP15813 335 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 HDCP19113 662 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 FDXRP22570 491 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 YWHAQP27348 245 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 SLC7A1P30825 629 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 EFEMP1Q12805 493 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 PARP15Q460N3 678 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CLEC6AQ6EIG7 209 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 MRNIPQ6NTE8 343 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 FBXL22Q6P050 247 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 SPNS2Q8IVW8 549 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 PGBD5Q8N414 524 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 TBATAQ96M53 351 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 MRPS26Q9BYN8 205 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 POPDC3Q9HBV1 291 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 IL37Q9NZH6 218 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CCL22O00626 93 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 CD3EAPO15446 510 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 RAMP2O60895 175 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 HSPA8P11142 646 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 YBEYP58557 167 aaPredicted RBP16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 STX1BP61266 288 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 LSAMPQ13449 338 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 USP41Q3LFD5 358 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 C6orf52Q5T4I8 152 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 PCYOX1LQ8NBM8 494 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 OR52K2Q8NGK3 314 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 RHEBL1Q8TAI7 183 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 IGSF8Q969P0 613 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 PTERQ96BW5 349 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 EFHD1Q9BUP0 239 aa16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 POLR1EQ9GZS1 481 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-202ENST00000535997 MTF2Q9Y483 593 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms