RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF883P0CG24 379 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 CD59P13987 128 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 NFKBIAP25963 317 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 HNF1BP35680 557 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 EPHB1P54762 984 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 PFN3P60673 137 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 IRF4Q15306 451 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 QPCTQ16769 361 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 PRAMEF14Q5SWL7 426 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 TSPAN33Q86UF1 283 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 NDUFAF2Q8N183 169 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 SLC22A18ASQ8N1D0 253 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 SLC35B2Q8TB61 432 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 COQ10AQ96MF6 247 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 FCRL5Q96RD9 977 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 ELF4Q99607 663 aaPredicted RBP22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 ERVMER34-1Q9H9K5 563 aa22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 TRMT1Q9NXH9 659 aaKnown RBP22.79■■□□□ 1.24
SFSWAP-204ENST00000535399 ANKRD36A6QL64 1941 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 A0A0U1RQS6 177 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 CAPN8A6NHC0 703 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 RABIFP47224 123 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 SLC14A1Q13336 389 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 LRRC14Q15048 493 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 SHBQ15464 509 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 CRTC1Q6UUV9 634 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 KDELC1Q6UW63 502 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 PTAR1Q7Z6K3 402 aaPredicted RBP22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 TM7SF3Q9NS93 570 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 DCHS1Q96JQ0 3298 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 ADAMTS9Q9P2N4 1935 aa22.78■■□□□ 1.24
SFSWAP-204ENST00000535399 ASCC3Q8N3C0 2202 aaKnown RBP22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 A0A1B0GTQ1 180 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 DCDC2BA2VCK2 349 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 KCNN4O15554 427 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 DFNA5O60443 496 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 PMPCBO75439 489 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 RXRGP48443 463 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 CCDC173Q0VFZ6 552 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 HSD11B1LQ7Z5J1 315 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 DCP2Q8IU60 420 aaKnown RBP22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 OXNAD1Q96HP4 312 aaPredicted RBP22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 LYSMD1Q96S90 227 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 FERMT1Q9BQL6 677 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 ADGRE3Q9BY15 652 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 UBP1Q9NZI7 540 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 FAM153AQ9UHL3 310 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 DNPEPQ9ULA0 475 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 PYCARDQ9ULZ3 195 aa22.77■■□□□ 1.24
SFSWAP-204ENST00000535399 DNAH14Q0VDD8 3507 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 ANKRD66B4E2M5 251 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 F5H423 210 aaPredicted RBP22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 PSMD11O00231 422 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 ZNF189O75820 626 aaPredicted RBP22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 CCT8P50990 548 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 WNT3AP56704 352 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 CDK18Q07002 472 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 GALNT3Q14435 633 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 ACOX1Q15067 660 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 PCSK7Q16549 785 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 CDKN3Q16667 212 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 TPRG1LQ5T0D9 272 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 KDELC2Q7Z4H8 507 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 PIP4P1Q86T03 277 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 ATG4AQ8WYN0 398 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 SPATA13Q96N96 652 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 GBA3Q9H227 469 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 RSPH14Q9UHP6 348 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 PCDHGB2Q9Y5G2 931 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 CABIN1Q9Y6J0 2220 aa22.76■■□□□ 1.23
SFSWAP-204ENST00000535399 GOLGA8CPA6NN73 597 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ENC1O14682 589 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 IL9RQ01113 521 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 PTSQ03393 145 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ARHGEF7Q14155 803 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ZNF569Q5MCW4 686 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ANKRD20A2Q5SQ80 823 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ANKRD20A1Q5TYW2 823 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 ANKRD20A3Q5VUR7 823 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 LRRC66Q68CR7 880 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 DBX2Q6ZNG2 339 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 OXR1Q8N573 874 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 CCDC110Q8TBZ0 833 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 GORASP1Q9BQQ3 440 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 MLPHQ9BV36 600 aaPredicted RBP22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 FRMD8P1Q9BZ68 369 aaPredicted RBP22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 JRKLQ9Y4A0 524 aa22.75■■□□□ 1.23
SFSWAP-204ENST00000535399 C5orf60A6NFR6 353 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 TOR1BO14657 336 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 LIASO43766 372 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 PCDHGA12O60330 932 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 STK10O94804 968 aaKnown RBP22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 NDST3O95803 873 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 PCCBP05166 539 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 ZNF30P17039 623 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 ETV3P41162 512 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 STC1P52823 247 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 YPEL5P62699 121 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 FZD2Q14332 565 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms