RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HNRNPABQ99729 332 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TTLL2Q9BWV7 592 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 SLC40A1Q9NP59 571 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ANO10Q9NW15 660 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 RMND1Q9NWS8 449 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 AIPL1Q9NZN9 384 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 LARSQ9P2J5 1176 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 POLG2Q9UHN1 485 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 IPO11Q9UI26 975 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 RAB21Q9UL25 225 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 UBE2J1Q9Y385 318 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ATP6V1DQ9Y5K8 247 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 NHSQ6T4R5 1651 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 FAM208AQ9UK61 1670 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 EMSYQ7Z589 1322 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 A0A1W2PP64 1363 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 KIF24Q5T7B8 1368 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 MYOM1P52179 1685 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CFAP73A6NFT4 308 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM90A8PA6NJQ4 464 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CD8B2A6NJW9 211 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 B4DGG1 531 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 H3BQF6 201 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 HNRNPDLO14979 420 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SPTLC2O15270 562 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 EIF3HO15372 352 aaKnown RBP eCLIP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NVLO15381 856 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SULT1B1O43704 296 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ZNF254O75437 659 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SKAP2O75563 359 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 GFPT2O94808 682 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 BAG3O95817 575 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TOMM40O96008 361 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ENO1P06733 434 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM90A13PP0C7W8 464 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM90A24PP0C7X0 464 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PSG1P11464 419 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CYP19A1P11511 503 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PTPN2P17706 415 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TBXAS1P24557 533 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 GABRB3P28472 473 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 HOXA7P31268 230 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PRKAR2BP31323 418 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 EPS15P42566 896 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ACADSBP45954 432 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CCT5P48643 541 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ZNF75DP51815 510 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 GEMIN4P57678 1058 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 EVCP57679 992 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CSHL1Q14406 222 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NFE2L1Q14494 772 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 MAPRE2Q15555 327 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 MANEAQ5SRI9 462 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 C10orf76Q5T2E6 689 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 GKAP1Q5VSY0 366 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 DAB2IPQ5VWQ8 1189 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TBC1D9BQ66K14 1250 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ARL6IP4Q66PJ3 421 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ACSM6Q6P461 480 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SARM1Q6SZW1 724 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 COLCA1Q6ZS62 124 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 RSRC2Q7L4I2 434 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SNX32Q86XE0 403 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PLA2G4DQ86XP0 818 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TRIML2Q8N7C3 387 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM47BQ8NA70 645 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SLC44A5Q8NCS7 719 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NCSTNQ92542 709 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CASP10Q92851 521 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CELF1Q92879 486 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ARHGEF2Q92974 986 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 GJA10Q969M2 543 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NRBF2Q96F24 287 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NLRP4Q96MN2 994 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PSKH2Q96QS6 385 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PRPF18Q99633 342 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 BPIFA3Q9BQP9 254 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM167BQ9BTA0 163 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 HTATIP2Q9BUP3 242 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 FAM234AQ9H0X4 552 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 CDCP1Q9H5V8 836 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 BICC1Q9H694 974 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 AGO4Q9HCK5 861 aaKnown RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 TMEM8AQ9HCN3 771 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 PREBQ9HCU5 417 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 NECTIN3Q9NQS3 549 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 DECR2Q9NUI1 292 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ZMYND8Q9ULU4 1186 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-219ENST00000534049 VPS4AQ9UN37 437 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 ZNF711Q9Y462 761 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 COMMD3-BMI1R4GMX3 469 aa4.39□□□□□ -1.71
ITGB1-219ENST00000534049 SHANK3Q9BYB0 1731 aa4.38□□□□□ -1.71
ITGB1-219ENST00000534049 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
ITGB1-219ENST00000534049 FAM170AA1A519 330 aa4.38□□□□□ -1.71
ITGB1-219ENST00000534049 ANO9A1A5B4 782 aa4.38□□□□□ -1.71
ITGB1-219ENST00000534049 SLC22A23A1A5C7 686 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms