RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NFKBIAP25963 317 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 VIPR1P32241 457 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 GARSP41250 739 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 RPIAP49247 311 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ARSEP51690 589 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 HK3P52790 923 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 GALNT2Q10471 571 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ARHGEF7Q14155 803 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PAFAH1B3Q15102 231 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PDK2Q15119 407 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PTPRRQ15256 657 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ELOCQ15369 112 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CNGA3Q16281 694 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ODF2Q5BJF6 829 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ARMC12Q5T9G4 340 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ESRP1Q6NXG1 681 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 SLC35F3Q8IY50 421 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 FSTL5Q8N475 847 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 SLC35G2Q8TBE7 412 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 FAM71BQ8TC56 605 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 RFFLQ8WZ73 363 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 NUS1Q96E22 293 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PDXPQ96GD0 296 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 DEPDC7Q96QD5 511 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ZNF670Q9BS34 389 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CLPBQ9H078 707 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 USP29Q9HBJ7 922 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 NCKIPSDQ9NZQ3 722 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 SALL4Q9UJQ4 1053 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PHTF1Q9UMS5 762 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 PCDHB1Q9Y5F3 818 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 RAI2Q9Y5P3 530 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ASPMQ8IZT6 3477 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 A0A0U1RQS6 177 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 A0A1W2PQ67 120 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 CFAP69A5D8W1 941 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TMEM202A6NGA9 273 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TPP1O14773 563 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 HTRA2O43464 458 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 HEXIM1O94992 359 aaKnown RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 PGLSO95336 258 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TNFP01375 233 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 KRT1P04264 644 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 GP1BAP07359 652 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 ALPIP09923 528 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 GM2AP17900 193 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 MAN1A1P33908 653 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 EPHB1P54762 984 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 DSC2Q02487 901 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 GBE1Q04446 702 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 AGERQ15109 404 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 COL28A1Q2UY09 1125 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 PERM1Q5SV97 790 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 C6orf132Q5T0Z8 1188 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 KCTD16Q68DU8 428 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TIGD7Q6NT04 549 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 USP45Q70EL2 814 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 HSD11B1LQ7Z5J1 315 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TSPAN33Q86UF1 283 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 GKN2Q86XP6 184 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 LRRC49Q8IUZ0 686 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 CNGA4Q8IV77 575 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 PELI3Q8N2H9 469 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 PQLC3Q8N755 202 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 DCBLD1Q8N8Z6 715 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 KYQ8NBH2 561 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 OR1E3Q8WZA6 343 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 FUBP1Q96AE4 644 aaKnown RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TBATAQ96M53 351 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 SMIM14Q96QK8 99 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 BOCQ9BWV1 1114 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 TRIM5Q9C035 493 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 NRSN2Q9GZP1 204 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 POLR1EQ9GZS1 481 aaKnown RBP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 WDR26Q9H7D7 661 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 CYP4F12Q9HCS2 524 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 FGF22Q9HCT0 170 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.73
CAPN1-225ENST00000533704 DKK4Q9UBT3 224 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 LCMT1Q9UIC8 334 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 PADI4Q9UM07 663 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 GPR34Q9UPC5 381 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 HYOU1Q9Y4L1 999 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 HEY1Q9Y5J3 304 aa10.46□□□□□ -0.73
CAPN1-225ENST00000533704 COL27A1Q8IZC6 1860 aaPredicted RBP10.46□□□□□ -0.74
CAPN1-225ENST00000533704 CACNA1GO43497 2377 aa10.46□□□□□ -0.74
CAPN1-225ENST00000533704 NPIPB15A6NHN6 443 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-225ENST00000533704 AKR1B15C9JRZ8 316 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-225ENST00000533704 MATN3O15232 486 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 BRINP1O60477 761 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 USP12O75317 370 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 HLA-DQB2P05538 268 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms