RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 GPR34Q9UPC5 381 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCDHGC4Q9Y5F7 938 aa12.46□□□□□ -0.41
CAPRIN1-213ENST00000533562 A8MX80 341 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 TMX2-CTNND1H3BSU7 103 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 HTRA2O43464 458 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 MAFKO60675 156 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 CYP1A2P05177 515 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 TCF4P15884 667 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PBX1P40424 430 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 KIAA1024LP59773 190 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 RALGDSQ12967 914 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 KRT81Q14533 505 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCDC122Q5T0U0 273 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 BROXQ5VW32 411 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PNCKQ6P2M8 343 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 ALKBH5Q6P6C2 394 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 CRTC1Q6UUV9 634 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 ATPAF2Q8N5M1 289 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PLA2G15Q8NCC3 412 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 FUBP1Q96AE4 644 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 ATXN7L3BQ96GX2 97 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 HIC2Q96JB3 615 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 SLC46A1Q96NT5 459 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 UBL7Q96S82 380 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 RBM15Q96T37 977 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 WDR26Q9H7D7 661 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 NOD2Q9HC29 1040 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PCDH18Q9HCL0 1135 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 ETNK2Q9NVF9 386 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 SIRPGQ9P1W8 387 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 RCOR3Q9P2K3 495 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 PHTF1Q9UMS5 762 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 SATB2Q9UPW6 733 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 ENTPD2Q9Y5L3 495 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
CAPRIN1-213ENST00000533562 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 A0A087X0T9 212 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TMEM202A6NGA9 273 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 PEX11BO96011 259 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TPM3P06753 285 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 FAM228BP0C875 321 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 KRT10P13645 584 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 CR2P20023 1033 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 MMP13P45452 471 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 UCNP55089 124 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TLE3Q04726 772 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TCEA2Q15560 299 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 C3orf38Q5JPI3 329 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 TAF8Q7Z7C8 310 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 NDUFAF2Q8N183 169 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 ARL14Q8N4G2 192 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 FAM46DQ8NEK8 389 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 WDR36Q8NI36 951 aaKnown RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 SCRN2Q96FV2 425 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 NSMCE3Q96MG7 304 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 FCRL3Q96P31 734 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 MGME1Q9BQP7 344 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 DPH1Q9BZG8 443 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 SYNDIG1Q9H7V2 258 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 HAUS2Q9NVX0 235 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 B4GALT6Q9UBX8 382 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 PCDHGA8Q9Y5G5 932 aa12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.42
CAPRIN1-213ENST00000533562 ATMQ13315 3056 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 GCN1Q92616 2671 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 NTN3O00634 580 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 CPP00450 1065 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 PTMSP20962 102 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 CES1P23141 567 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 IL4RP24394 825 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 VIPR1P32241 457 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 SLC25A11Q02978 314 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 TXNRD3NBQ6F5E7 133 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 OGFOD3Q6PK18 319 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 MAP7D3Q8IWC1 876 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 PGBD5Q8N414 524 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 KYQ8NBH2 561 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 KCTD6Q8NC69 237 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 KCNE4Q8WWG9 221 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 OR1E3Q8WZA6 343 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCDC74AQ96AQ1 378 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 NUS1Q96E22 293 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms