RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PSMB4P28070 264 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 CTSKP43235 329 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 WNT3AP56704 352 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 LMNB2Q03252 620 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 GALNT3Q14435 633 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 STAT4Q14765 748 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 CDKN3Q16667 212 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ITPRIPL1Q6GPH6 555 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 CRTC1Q6UUV9 634 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 IQCHQ86VS3 1027 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 NDUFAF2Q8N183 169 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 MFSD2AQ8NA29 543 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 TP53I13Q8NBR0 393 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 MS4A14Q96JA4 679 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 MRGPRX2Q96LB1 330 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 COQ10AQ96MF6 247 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 LYSMD1Q96S90 227 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ADGRE3Q9BY15 652 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ZDHHC5Q9C0B5 715 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 MBNL1Q9NR56 388 aaKnown RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF148Q9UQR1 794 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 SNX11Q9Y5W9 270 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 HS3ST3A1Q9Y663 406 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 KNL1Q8NG31 2342 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ANKRD36A6QL64 1941 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 CEP250Q9BV73 2442 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PI4KAP42356 2102 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 LOC285095A0A1B0GVY8 99 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 TLR4O00206 839 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 CES2O00748 559 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 FANCGO15287 622 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 LZTS3O60299 673 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 ANXA9O76027 345 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 NDST3O95803 873 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 ITGAVP06756 1048 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 STIP1P31948 543 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 IGFALSP35858 605 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 GEMP55040 296 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 C21orf59P57076 290 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 NXPH1P58417 271 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 OVGP1Q12889 678 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 MPP3Q13368 585 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PARP6Q2NL67 630 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 WSCD2Q2TBF2 565 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PAPD7Q5XG87 772 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 LRRC66Q68CR7 880 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 KYAT3Q6YP21 454 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 ARHGEF18Q6ZSZ5 1173 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 HSD11B1LQ7Z5J1 315 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 KLHDC8BQ8IXV7 354 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PRELID2Q8N945 189 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 OR13H1Q8NG92 308 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 OR2I1PQ8NGU4 316 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 RMDN1Q96DB5 314 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 MLPHQ9BV36 600 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 GTPBP2Q9BX10 602 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 C1QTNF7Q9BXJ2 289 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 SMARCAL1Q9NZC9 954 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 DRG1Q9Y295 367 aaKnown RBP12.01□□□□□ -0.49
SSBP3-214ENST00000533209 PLXNA2O75051 1894 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 RALGAPA1Q6GYQ0 2036 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 TRPM6Q9BX84 2022 aa12.01□□□□□ -0.49
SSBP3-214ENST00000533209 DOCK9Q9BZ29 2069 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12□□□□□ -0.49
SSBP3-214ENST00000533209 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 A6NNZ2 444 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 PSMD11O00231 422 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 PGRMC1O00264 195 aaKnown RBP12□□□□□ -0.49
SSBP3-214ENST00000533209 FPGTO14772 594 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF185O15231 689 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 CLDN7O95471 211 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 METTL18O95568 372 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 EPOP01588 193 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ATXN1LP0C7T5 689 aaKnown RBP12□□□□□ -0.49
SSBP3-214ENST00000533209 THEGLP0DJG4 465 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF30P17039 623 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ADRA1AP35348 466 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 CHRNA4P43681 627 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 STC1P52823 247 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 LIMK1P53667 647 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 PFN3P60673 137 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ARHGAP8P85298 464 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 PTSQ03393 145 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ARHGEF7Q14155 803 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 LRRC14Q15048 493 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ACOX1Q15067 660 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 IRF4Q15306 451 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 HLA-BQ31612 363 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 STPG1Q5TH74 334 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 DENND2CQ68D51 928 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 TECPR1Q7Z6L1 1165 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 MINDY1Q8N5J2 469 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms