RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM26Q6ZUK4 368 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 PAGE2Q7Z2X7 111 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 SYT12Q8IV01 421 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ZSCAN18Q8TBC5 510 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ASZ1Q8WWH4 475 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 BTBD10Q9BSF8 475 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 PTPRHQ9HD43 1115 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 EPHB6O15197 1021 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 CNOT3O75175 753 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 UQCRBP14927 111 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 S100A3P33764 101 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 FLT3P36888 993 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 RPL14P50914 215 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 CCR4P51679 360 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 CRADDP78560 199 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 DLG2Q15700 870 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ZCCHC23Q6ZST2 131 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 KLHL32Q96NJ5 620 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 BDH2Q9BUT1 245 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 SLC25A23Q9BV35 468 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ADPRHL2Q9NX46 363 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 TM7SF2O76062 418 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 PIGNO95427 931 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 GALTP07902 379 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 COX7A2P14406 83 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 KCNE1P15382 129 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 NDST2P52849 883 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ALFQ53S48 1182 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 NETO2Q8NC67 525 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 SEPHS2Q99611 448 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 BCAS3Q9H6U6 928 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ALG9Q9H6U8 611 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 GTF2A1LQ9UNN4 478 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 E7ENQ6 273 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 RB1P06400 928 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 BMP6P22004 513 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 L1CAMP32004 1257 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 SOX6P35712 828 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 FRG1Q14331 258 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 ESRP1Q6NXG1 681 aaKnown RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 POTEHQ6S545 545 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 UNC5AQ6ZN44 842 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 P2RY11Q96G91 374 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 OSBPL10Q9BXB5 764 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 EPS8L2Q9H6S3 715 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
PTPRK-221ENST00000532331 WRAP73Q9P2S5 460 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-221ENST00000532331 HNRNPCP07910 306 aaKnown RBP eCLIP11.31□□□□□ -0.65e-7■■□□□ 13
PTPRK-221ENST00000532331 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 HNF4AP41235 474 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 GPR17Q13304 367 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SLC41A1Q8IVJ1 513 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 AHI1Q8N157 1196 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 TRPC4APQ8TEL6 797 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 HDAC10Q969S8 669 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 C16orf70Q9BSU1 422 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SYBUQ9NX95 663 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 PIGRP01833 764 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 NAA20P61599 178 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 WDR45BQ5MNZ6 344 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 EID3Q8N140 333 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ACTRT2Q8TDY3 377 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 DTNBP1Q96EV8 351 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 UGT2B28Q9BY64 529 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KLQ9UEF7 1012 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 PIPSLA2A3N6 862 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 NDST3O95803 873 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CDH3P22223 829 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 PFKFB4Q16877 469 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 AP5B1Q2VPB7 878 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 PHC3Q8NDX5 983 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms