RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LYSMD3Q7Z3D4 306 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 PPHLN1Q8NEY8 458 aaKnown RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 PARD6BQ9BYG5 372 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 IL22Q9GZX6 179 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ZFYVE1Q9HBF4 777 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 SAMD15Q9P1V8 674 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 USP36Q9P275 1121 aaKnown RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 ARL5AQ9Y689 179 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3DA0A087WVF3 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3IA0A087WXS9 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3EA0A087X179 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3KA0A087X1G2 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3FA6NER0 549 aaPredicted RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3LB9A6J9 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 AREL1O15033 823 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 AXIN1O15169 862 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ZNF217O75362 1048 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3HP0C7X1 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 LHCGRP22888 699 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ACSL1P33121 698 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 MMP12P39900 470 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ADPRHP54922 357 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TAS2R38P59533 333 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 DMWDQ09019 674 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3GQ6DHY5 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3CQ6IPX1 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 DPPA4Q7L190 304 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 ANKMY2Q8IV38 441 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 TBC1D3Q8IZP1 549 aaPredicted RBP17.69■□□□□ 0.42
CTSB-222ENST00000531551 FRMD1Q8N878 549 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 BRSK1Q8TDC3 778 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 CXorf40AQ8TE69 158 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 SAYSD1Q9NPB0 183 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 HACD3Q9P035 362 aa17.69■□□□□ 0.42
CTSB-222ENST00000531551 SLC7A4O43246 635 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 SPINT1O43278 529 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 PLRG1O43660 514 aaKnown RBP17.68■□□□□ 0.42
CTSB-222ENST00000531551 PAPSS2O95340 614 aaPredicted RBP17.68■□□□□ 0.42
CTSB-222ENST00000531551 CRTAMO95727 393 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 ELFN1P0C7U0 828 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 MYBL2P10244 700 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 MAGEA3P43357 314 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 LIG3P49916 1009 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 MSLNQ13421 630 aaPredicted RBP17.68■□□□□ 0.42
CTSB-222ENST00000531551 PCID2Q5JVF3 399 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 ZBED8Q8IZ13 594 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 FAM160A2Q8N612 972 aaPredicted RBP17.68■□□□□ 0.42
CTSB-222ENST00000531551 MYRIPQ8NFW9 859 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 RUBCNQ92622 972 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 SRPK1Q96SB4 655 aaKnown RBP17.68■□□□□ 0.42
CTSB-222ENST00000531551 FAM129AQ9BZQ8 928 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 TRABDQ9H4I3 376 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 BPIFA1Q9NP55 256 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 CHRAC1Q9NRG0 131 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 KCTD3Q9Y597 815 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 ANKRD36A6QL64 1941 aa17.68■□□□□ 0.42
CTSB-222ENST00000531551 C2orf81A6NN90 581 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 MMP20O60882 483 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 C7P10643 843 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 ADRA1DP25100 572 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 TMPRSS15P98073 1019 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 RALGDSQ12967 914 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 PTPRCAPQ14761 206 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 CNGA3Q16281 694 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 AGGF1Q8N302 714 aaeCLIP17.67■□□□□ 0.42
CTSB-222ENST00000531551 TOE1Q96GM8 510 aaKnown RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 SIGLEC10Q96LC7 697 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 LYSMD1Q96S90 227 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 C11orf16Q9NQ32 467 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 PRMT8Q9NR22 394 aaPredicted RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 CHMP2BQ9UQN3 213 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 FNDC3AQ9Y2H6 1198 aaKnown RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 TSPAN6O43657 245 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 AP1G1O43747 822 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 MCM3P25205 808 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 CD6P30203 668 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 OXTRP30559 389 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 ELK3P41970 407 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 FNTBP49356 437 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 PTSQ03393 145 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 FASTKD3Q14CZ7 662 aaKnown RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 ACOX1Q15067 660 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 TAF1AQ15573 450 aaPredicted RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 FAM131CQ96AQ9 280 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 STAMBPL1Q96FJ0 436 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 TRIM56Q9BRZ2 755 aaKnown RBP17.67■□□□□ 0.42
CTSB-222ENST00000531551 SGK2Q9HBY8 427 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 COQ6Q9Y2Z9 468 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 TCAF1Q9Y4C2 921 aa17.67■□□□□ 0.42
CTSB-222ENST00000531551 LDB2O43679 373 aa17.66■□□□□ 0.42
CTSB-222ENST00000531551 LZTS3O60299 673 aaPredicted RBP17.66■□□□□ 0.42
CTSB-222ENST00000531551 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
CTSB-222ENST00000531551 CDKN3Q16667 212 aa17.66■□□□□ 0.42
CTSB-222ENST00000531551 TMEM52BQ4KMG9 183 aa17.66■□□□□ 0.42
CTSB-222ENST00000531551 USP39Q53GS9 565 aaKnown RBP17.66■□□□□ 0.42
CTSB-222ENST00000531551 WDR93Q6P2C0 686 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms