RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TBXAS1P24557 533 aaPredicted RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 MPSTP25325 297 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CD1CP29017 333 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 ALDH4A1P30038 563 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 MAN1A1P33908 653 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 PSMC2P35998 433 aaKnown RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 ARF5P84085 180 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 MAP7Q14244 749 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 LRRC14Q15048 493 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 STK38Q15208 465 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 RABEP1Q15276 862 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CNGA2Q16280 664 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 WSCD2Q2TBF2 565 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CBWD6Q4V339 395 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CBWD3Q5JTY5 395 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CBWD5Q5RIA9 395 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 RETSATQ6NUM9 610 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 SHC4Q6S5L8 630 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CEACAM20Q6UY09 585 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 TFAP2DQ7Z6R9 452 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 TMEM135Q86UB9 458 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 C17orf82Q86X59 251 aaPredicted RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 ESX1Q8N693 406 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CCL4L1Q8NHW4 92 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 VOPP1Q96AW1 172 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 APOOQ9BUR5 198 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 TMEM168Q9H0V1 697 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 TRIT1Q9H3H1 467 aaKnown RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 MRPL40Q9NQ50 206 aaKnown RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 LUZP4Q9P127 313 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 HECAQ9UBI9 543 aaPredicted RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 ENTPD4Q9Y227 616 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 SLC5A6Q9Y289 635 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.27□□□□□ -1.09
CD44-232ENST00000531118 ACTL7AQ9Y615 435 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 RPS6KL1Q9Y6S9 549 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 IGHV1OR21-1A0A087WYE8 117 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 CDC14CA4D256 554 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 TMEM202A6NGA9 273 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 E5RJQ4 531 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 POLR2DO15514 142 aaKnown RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 ZW10O43264 779 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 STX10O60499 249 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 GSRP00390 522 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 BMP6P22004 513 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 DLSTP36957 453 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 ACADSBP45954 432 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 LEPRP48357 1165 aaKnown RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 PGDP52209 483 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 EPHA4P54764 986 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 YWHAZP63104 245 aaKnown RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 CDK17Q00537 523 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 MTM1Q13496 603 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 ERV3-1Q14264 604 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 OTUD1Q5VV17 481 aaPredicted RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 NKAIN2Q5VXU1 208 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 IRF2BP1Q8IU81 584 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 APLFQ8IW19 511 aaPredicted RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 MCEMP1Q8IX19 187 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 ZNF683Q8IZ20 524 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 RYBPQ8N488 228 aaPredicted RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 Q8NA96 180 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 LINC00301Q8NCQ3 95 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 OR56A4Q8NGH8 313 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 ZDHHC1Q8WTX9 485 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 KLHL32Q96NJ5 620 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 SLC2A13Q96QE2 648 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 ZPBPQ9BS86 351 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 OSBPL1AQ9BXW6 950 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 TRIM55Q9BYV6 548 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 APMAPQ9HDC9 416 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CD44-232ENST00000531118 KCND3Q9UK17 655 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 CROTQ9UKG9 612 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 PHTF1Q9UMS5 762 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 PCDHB4Q9Y5E5 795 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 SNX10Q9Y5X0 201 aa8.26□□□□□ -1.09
CD44-232ENST00000531118 A6NCN8 305 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 KRIT1O00522 736 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 PPP6R2O75170 966 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 CD160O95971 181 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 ITIH2P19823 946 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 GPD2P43304 727 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 GPR3P46089 330 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 MC2RQ01718 297 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 PTSQ03393 145 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 LRMPQ12912 555 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 MTA1Q13330 715 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 SEMA5AQ13591 1074 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 INPP5AQ14642 412 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 TAF5Q15542 800 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 TMEM52BQ4KMG9 183 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 ZRANB3Q5FWF4 1079 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 DCAF17Q5H9S7 520 aaPredicted RBP8.25□□□□□ -1.09
CD44-232ENST00000531118 CPZQ66K79 652 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 ZGRF1Q86YA3 2104 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 TP53INP2Q8IXH6 220 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 DEFB106AQ8N104 65 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms