RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 TRIM49P0CI25 452 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 TRIM49CP0CI26 452 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 PRCPP42785 496 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 GAD2Q05329 585 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 KDSRQ06136 332 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 KNOP1Q1ED39 458 aaKnown RBP7.49□□□□□ -1.21
CHKA-205ENST00000530730 TIGD2Q4W5G0 525 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 HSP90AA4PQ58FG1 418 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SCARA5Q6ZMJ2 495 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 TMEM25Q86YD3 366 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SYT12Q8IV01 421 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 BBS7Q8IWZ6 715 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 HMGB4Q8WW32 186 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 OVCA2Q8WZ82 227 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 FBXO32Q969P5 355 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SYAP1Q96A49 352 aaPredicted RBP7.49□□□□□ -1.21
CHKA-205ENST00000530730 OTUB2Q96DC9 234 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SDCBP2Q9H190 292 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 NUP62CLQ9H1M0 184 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 TOR3AQ9H497 397 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 CLSTN2Q9H4D0 955 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SMYD3Q9H7B4 428 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 EMC7Q9NPA0 242 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 BCCIPQ9P287 314 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHKA-205ENST00000530730 EVLQ9UI08 416 aaPredicted RBP7.49□□□□□ -1.21
CHKA-205ENST00000530730 CHST2Q9Y4C5 530 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 MYH10P35580 1976 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 PCSK5Q92824 1860 aa7.49□□□□□ -1.21
CHKA-205ENST00000530730 SPAG17Q6Q759 2223 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 EML5Q05BV3 1969 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 TCRBV21S2A2A0A5A6 115 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 FAM92AA1XBS5 289 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 TMEM200CA6NKL6 621 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 HOXC11O43248 304 aaPredicted RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 B3GALT2O43825 422 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 KDM1AO60341 852 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 OBSL1O75147 1896 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 BEST1O76090 585 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 TBX18O95935 607 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 ENGP17813 658 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 NR2F2P24468 414 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SLC5A3P53794 718 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 IL2P60568 153 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 LMAN2Q12907 356 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 BYSLQ13895 437 aaKnown RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 BMT2Q1RMZ1 405 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 ANO4Q32M45 955 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SPDYCQ5MJ68 293 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 ACOT1Q86TX2 421 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 VRK3Q8IV63 474 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 C12orf56Q8IXR9 622 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 DEFB119Q8N690 84 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 DEFB124Q8NES8 71 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 ZMIZ2Q8NF64 920 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 PARD3BQ8TEW8 1205 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SMOQ99835 787 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 MED10Q9BTT4 135 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 NUSAP1Q9BXS6 441 aaKnown RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 KCTD10Q9H3F6 313 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SPHK2Q9NRA0 654 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 COMMD8Q9NX08 183 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 CGNQ9P2M7 1197 aaKnown RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 DEC1Q9P2X7 70 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 HOOK1Q9UJC3 728 aaKnown RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 PILRBQ9UKJ0 227 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 MYO16Q9Y6X6 1858 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 SPEGQ15772 3267 aa7.48□□□□□ -1.21
CHKA-205ENST00000530730 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
CHKA-205ENST00000530730 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 A0A1W2PQF6 199 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 LRRIQ3A6PVS8 624 aaPredicted RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 B5MCH6 92 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 CALUO43852 315 aaPredicted RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 VNN1O95497 513 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 GASTP01350 101 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 IRF1P10914 325 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 GABRG2P18507 467 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 NTSR1P30989 418 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 WASP42768 502 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 TUBP50607 506 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 AP3M2P53677 418 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 SEMA3BQ13214 749 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 BIRC3Q13489 604 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 SGSM1Q2NKQ1 1148 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 ZNF699Q32M78 642 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 DPCR1Q3MIW9 517 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 PREPLQ4J6C6 727 aaPredicted RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 C10orf76Q5T2E6 689 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 ZNF658Q5TYW1 1059 aaPredicted RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 BROXQ5VW32 411 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 LYSMD4Q5XG99 296 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 CAVIN1Q6NZI2 390 aaKnown RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 TRMT11Q7Z4G4 463 aaKnown RBP7.47□□□□□ -1.21
CHKA-205ENST00000530730 GDF7Q7Z4P5 450 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 PIP4P1Q86T03 277 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 CREBRFQ8IUR6 639 aa7.47□□□□□ -1.21
CHKA-205ENST00000530730 CRYBG2Q8N1P7 616 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms