RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 SLC8B1Q6J4K2 584 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 FOXR2Q6PJQ5 311 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 LVRNQ6Q4G3 990 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 PTDSS2Q9BVG9 487 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 XYLT2Q9H1B5 865 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 ASAH2Q9NR71 780 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 ZNF69Q9UC07 566 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 EIF2B4Q9UI10 523 aaKnown RBP7.23□□□□□ -1.25
SVIP-204ENST00000530199 TBX20Q9UMR3 447 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 HPSEQ9Y251 543 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 INSL5Q9Y5Q6 135 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 NF1P21359 2839 aa7.23□□□□□ -1.25
SVIP-204ENST00000530199 MYH9P35579 1960 aaKnown RBP7.22□□□□□ -1.25
SVIP-204ENST00000530199 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
SVIP-204ENST00000530199 TOR1BO14657 336 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 PRRG1O14668 218 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 FLRT2O43155 660 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 COQ9O75208 318 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ELANEP08246 267 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 NPPBP16860 134 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ACO1P21399 889 aaKnown RBP7.22□□□□□ -1.25
SVIP-204ENST00000530199 ELF1P32519 619 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ACTN2P35609 894 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 MCM2P49736 904 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 HAND2P61296 217 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ROR1Q01973 937 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 NSUN2Q08J23 767 aaKnown RBP eCLIP7.22□□□□□ -1.25
SVIP-204ENST00000530199 RUNX3Q13761 415 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ARHGAP40Q5TG30 622 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 MMS22LQ6ZRQ5 1243 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 CLNKQ7Z7G1 428 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ERICH1Q86X53 443 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 GATAD2AQ86YP4 633 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ITPRIPQ8IWB1 547 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 ELMOD1Q8N336 334 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 Q8TCH9 128 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 RLN3Q8WXF3 142 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 CCDC51Q96ER9 411 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 FAM227BQ96M60 508 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 P2RY13Q9BPV8 354 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 PAAF1Q9BRP4 392 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 TEX101Q9BY14 249 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 SLITRK6Q9H5Y7 841 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 CXorf36Q9H7Y0 433 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 PRDM16Q9HAZ2 1276 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 HPS4Q9NQG7 708 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 NRBP2Q9NSY0 501 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 RRN3Q9NYV6 651 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 CEP72Q9P209 647 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 DTNAQ9Y4J8 743 aa7.22□□□□□ -1.25
SVIP-204ENST00000530199 HELZP42694 1942 aaKnown RBP7.22□□□□□ -1.25
SVIP-204ENST00000530199 SPTBN1Q01082 2364 aaKnown RBP7.22□□□□□ -1.25
SVIP-204ENST00000530199 NUP210Q8TEM1 1887 aaPredicted RBP7.21□□□□□ -1.25
SVIP-204ENST00000530199 BAZ2BQ9UIF8 2168 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 PRAMEF33A0A0G2JMD5 474 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 A0A1W2PS29 197 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 DDX39AO00148 427 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 IRAK2O43187 625 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TNFSF14O43557 240 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 RGS10O43665 173 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 PRAMEF10O60809 474 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 ERN1O75460 977 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 PPIFP30405 207 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 PRKAG1P54619 331 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 ZNF33AQ06730 810 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 CCDC173Q0VFZ6 552 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 GRIK2Q13002 908 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 DYRK1AQ13627 763 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TIGD6Q17RP2 521 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 PTCHD3Q3KNS1 767 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TBC1D25Q3MII6 688 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 MZT2AQ6P582 158 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 SLC36A4Q6YBV0 504 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 NIPA1Q7RTP0 329 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TRMT1LQ7Z2T5 733 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 GDF7Q7Z4P5 450 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.21□□□□□ -1.26
SVIP-204ENST00000530199 FRMD1Q8N878 549 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 ZNF248Q8NDW4 579 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 OTUD7AQ8TE49 926 aaPredicted RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 SETD7Q8WTS6 366 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 UBXN10Q96LJ8 280 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TBATAQ96M53 351 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 FAM167BQ9BTA0 163 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 TRIM5Q9C035 493 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 FAM124BQ9H5Z6 455 aaPredicted RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 PSTPIP2Q9H939 334 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 CPNE5Q9HCH3 593 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 STARD5Q9NSY2 213 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 KCNE5Q9UJ90 142 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 NDRG4Q9ULP0 352 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 MAFFQ9ULX9 164 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 MMP17Q9ULZ9 603 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 MTO1Q9Y2Z2 717 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 PCDHA10Q9Y5I2 948 aa7.21□□□□□ -1.26
SVIP-204ENST00000530199 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.26
SVIP-204ENST00000530199 MYO16Q9Y6X6 1858 aa7.2□□□□□ -1.26
SVIP-204ENST00000530199 OTOGQ6ZRI0 2925 aa7.2□□□□□ -1.26
SVIP-204ENST00000530199 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
SVIP-204ENST00000530199 DBX1A6NMT0 343 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms