RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 UGP2Q16851 508 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 BRAT1Q6PJG6 821 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 CLEC18BQ6UXF7 455 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 ARCQ7LC44 396 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 NLRP14Q86W24 1093 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 XYLT1Q86Y38 959 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 CLEC18CQ8NCF0 446 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 RCBTB1Q8NDN9 531 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 EFHD1Q9BUP0 239 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 TMEM168Q9H0V1 697 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 SUV39H2Q9H5I1 410 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 CYP4F12Q9HCS2 524 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 NDFIP2Q9NV92 336 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 ANKRD36A6QL64 1941 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 SDK2Q58EX2 2172 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 IGHV5-10-1A0A0J9YXX1 117 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 BLACEA4D250 179 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 CFAP69A5D8W1 941 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 RAD1O60671 282 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 LRIG2O94898 1065 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 PLEKP08567 350 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 HOXC4P09017 264 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 FGF3P11487 239 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 PON1P27169 355 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 SDC4P31431 198 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 CDH5P33151 784 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 MAN1A1P33908 653 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 STAT1P42224 750 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 GPR3P46089 330 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 YBEYP58557 167 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 RAB15P59190 212 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 MC1RQ01726 317 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 APBA1Q02410 837 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 ILF3Q12906 894 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS11-203ENST00000529545 CDO1Q16878 200 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 ARTNQ5T4W7 220 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 DCAF12Q5T6F0 453 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 BNIPLQ7Z465 357 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 DNAAF5Q86Y56 855 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 ELOA2Q8IYF1 753 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 ZDHHC1Q8WTX9 485 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 APOBEC4Q8WW27 367 aaKnown RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 ART4Q93070 314 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 FUBP1Q96AE4 644 aaKnown RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 SLC45A3Q96JT2 553 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 CCDC74BQ96LY2 380 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 ZNF641Q96N77 438 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 PSMG3-AS1Q96PY0 264 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 TEFMQ96QE5 360 aaKnown RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 DPYSL5Q9BPU6 564 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 NUDT22Q9BRQ3 303 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 DDA1Q9BW61 102 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 GSDMCQ9BYG8 508 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 GPN2Q9H9Y4 310 aaPredicted RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 FGF22Q9HCT0 170 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
VPS11-203ENST00000529545 SLC39A1Q9NY26 324 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 TMEM59LQ9UK28 342 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
VPS11-203ENST00000529545 TSPAN11A1L157 253 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 TMEM202A6NGA9 273 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 BIN1O00499 593 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 TEX33O43247 280 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 RECQL5O94762 991 aaPredicted RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 PIGNO95427 931 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 PRKAR1AP10644 381 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 CCNB1P14635 433 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 CYP11B1P15538 503 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 MAP4P27816 1152 aaKnown RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 MMP12P39900 470 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 LIMK2P53671 638 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 MAZP56270 477 aaKnown RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 KLRB1Q12918 225 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 LACTB2Q53H82 288 aaPredicted RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 C2CD6Q53TS8 623 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 MANEALQ5VSG8 457 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 TAF3Q5VWG9 929 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 ZNF438Q7Z4V0 828 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 FAM129CQ86XR2 697 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 SFTPA2Q8IWL1 248 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 FAM71AQ8IYT1 594 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 NRSN1Q8IZ57 195 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 EMC1Q8N766 993 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 NETO2Q8NC67 525 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 PLA2G15Q8NCC3 412 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 OR4D9Q8NGE8 314 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 VOPP1Q96AW1 172 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 EXOC2Q96KP1 924 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 WDR26Q9H7D7 661 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 SUDS3Q9H7L9 328 aaPredicted RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms