RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	KCNK12	Q9HB15	430 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	USP29	Q9HBJ7	922 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SLC7A8	Q9UHI5	535 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SDR42E2	A6NKP2	422 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	FAM159B	A6NKW6	160 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PLK1	P53350	603 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SULT2A1	Q06520	285 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SLC10A2	Q12908	348 aa	Predicted RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CDC16	Q13042	620 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SERINC3	Q13530	473 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	IL31	Q6EBC2	164 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	NPNT	Q6UXI9	565 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ACAD11	Q709F0	780 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	AHI1	Q8N157	1196 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	BBS5	Q8N3I7	341 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	DCAF4L2	Q8NA75	395 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	FBXO27	Q8NI29	283 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	WFIKKN2	Q8TEU8	576 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ASIC4	Q96FT7	647 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	CELF6	Q96J87	481 aa	Known RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ZNF599	Q96NL3	588 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PLA2G2F	Q9BZM2	168 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SLC39A8	Q9C0K1	460 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	SP110	Q9HB58	689 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PLAC1	Q9HBJ0	212 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ATP13A1	Q9HD20	1204 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	NDFIP2	Q9NV92	336 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	PLK2	Q9NYY3	685 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	ZC3H7B	Q9UGR2	993 aa	Known RBP	14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	VPS28	Q9UK41	221 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	FBXO10	Q9UK96	956 aa		14.68	□□□□□ -0.06
NR1H3-231	ENST00000529540	BRWD1	Q9NSI6	2320 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	CXorf49	A8MYA2	514 aa	Predicted RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	CCNT2	O60583	730 aa	Known RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	ARSA	P15289	507 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	CNTF	P26441	200 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	CPOX	P36551	454 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	MAGEA3	P43357	314 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	AQP5	P55064	265 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	IL10RB	Q08334	325 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	RFTN1	Q14699	578 aa	Predicted RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	RNF219	Q5W0B1	726 aa	Predicted RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	RETSAT	Q6NUM9	610 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	ADHFE1	Q8IWW8	467 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	CTAGE3P	Q8IX95	158 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	HTR3C	Q8WXA8	447 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	BHMT	Q93088	406 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	HMCES	Q96FZ2	354 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	ZFYVE19	Q96K21	471 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	FEM1A	Q9BSK4	669 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	THTPA	Q9BU02	230 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	MECR	Q9BV79	373 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	ACE2	Q9BYF1	805 aa	Predicted RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	NOL6	Q9H6R4	1146 aa	Known RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	HPS4	Q9NQG7	708 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	THAP1	Q9NVV9	213 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	DEC1	Q9P2X7	70 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	LIMD1	Q9UGP4	676 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	IPO11	Q9UI26	975 aa	Known RBP	14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	SOX13	Q9UN79	622 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	SLC27A6	Q9Y2P4	619 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	MFHAS1	Q9Y4C4	1052 aa		14.67	□□□□□ -0.06
NR1H3-231	ENST00000529540	LOC730098	B7Z3J9	87 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	ARNTL	O00327	626 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	KDELR3	O43731	214 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	DGKG	P49619	791 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	RENBP	P51606	427 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	RPS6KA3	P51812	740 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	STX3	Q13277	289 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	PDCD2	Q16342	344 aa	Predicted RBP	14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	C1orf146	Q5VVC0	180 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	CAND1	Q86VP6	1230 aa	Known RBP	14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	JADE3	Q92613	823 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	DTNBP1	Q96EV8	351 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	PPP1R2P1	Q96PQ5	205 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	CENPK	Q9BS16	269 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	VCX3B	Q9H321	246 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	FAM96A	Q9H5X1	160 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	S100A14	Q9HCY8	104 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	SMYD2	Q9NRG4	433 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540	RAB6B	Q9NRW1	208 aa		14.66	□□□□□ -0.06
NR1H3-231	ENST00000529540		A0A088AWK7	358 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	PRR5-ARHGAP8	B1AHC4	643 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	PDLIM1	O00151	329 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	MATN3	O15232	486 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	MAFK	O60675	156 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	KLHL2	O95198	593 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	UBTFL6	P0CB48	400 aa	Predicted RBP	14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	PABPC1	P11940	636 aa	Known RBP	14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	GLUL	P15104	373 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	IL9	P15248	144 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	SH3BGR	P55822	239 aa	Predicted RBP	14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	POLE2	P56282	527 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	ARHGAP8	P85298	464 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	BTK	Q06187	659 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	LMAN2	Q12907	356 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	MTM1	Q13496	603 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	TUBB3	Q13509	450 aa		14.65	□□□□□ -0.06
NR1H3-231	ENST00000529540	CUL3	Q13618	768 aa		14.65	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms