RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 ARMC12Q5T9G4 340 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 ZCCHC8Q6NZY4 707 aaKnown RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 HNRNPLLQ8WVV9 542 aaKnown RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 APOLD1Q96LR9 279 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 SEMA3CQ99985 751 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 APOOQ9BUR5 198 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 POLR1EQ9GZS1 481 aaKnown RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 RBM22Q9NW64 420 aaKnown RBP eCLIP13.13□□□□□ -0.314e-7■■■□□ 15.9
SSH3-206ENST00000529224 KCTD5Q9NXV2 234 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 NCKIPSDQ9NZQ3 722 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 B4GALT6Q9UBX8 382 aa13.13□□□□□ -0.31
SSH3-206ENST00000529224 SMG1Q96Q15 3661 aaKnown RBP13.13□□□□□ -0.31
SSH3-206ENST00000529224 ADAMTS20P59510 1910 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 LMO7DNF2Z398 122 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 RASGRP1O95267 797 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 KRT1P04264 644 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 CCNB1P14635 433 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 ZFXP17010 805 aaPredicted RBP13.12□□□□□ -0.31
SSH3-206ENST00000529224 MAGEA1P43355 309 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
SSH3-206ENST00000529224 CYP4F3Q08477 520 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 ACOX1Q15067 660 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 COL28A1Q2UY09 1125 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 HES3Q5TGS1 186 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 USP45Q70EL2 814 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 RHOT1Q8IXI2 618 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 NDUFAF2Q8N183 169 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
SSH3-206ENST00000529224 CCNYQ8ND76 341 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 GLMNQ92990 594 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 WDR92Q96MX6 357 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
SSH3-206ENST00000529224 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
SSH3-206ENST00000529224 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 DKK4Q9UBT3 224 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 SALL4Q9UJQ4 1053 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 OR1A2Q9Y585 309 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 RAI2Q9Y5P3 530 aa13.12□□□□□ -0.31
SSH3-206ENST00000529224 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 A8MX80 341 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CACNB4O00305 520 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 APOL1O14791 398 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SPOPO43791 374 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 LCA5LO95447 670 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 GP1BAP07359 652 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 ANXA6P08133 673 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 HOXC4P09017 264 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 CTSEP14091 401 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CA4P22748 312 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CYLC1P35663 651 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 ZNF75DP51815 510 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 HK3P52790 923 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 HADHBP55084 474 aaKnown RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 KIAA1024LP59773 190 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 ARHGEF7Q14155 803 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SPA17Q15506 151 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CNGA3Q16281 694 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 ALG11Q2TAA5 492 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 DEFB133Q30KQ1 61 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 HID1Q8IV36 788 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CCDC13Q8IYE1 715 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 CACTIN-AS1Q8N1I8 211 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SDR16C5Q8N3Y7 309 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 FSTL5Q8N475 847 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 PLA2G15Q8NCC3 412 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 NUS1Q96E22 293 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 SCRN2Q96FV2 425 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 MRFAP1L1Q96HT8 127 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 PNMA8BQ9ULN7 279 aaPredicted RBP13.11□□□□□ -0.31
SSH3-206ENST00000529224 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 PPIL1Q9Y3C6 166 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 TTLL3Q9Y4R7 772 aa13.11□□□□□ -0.31
SSH3-206ENST00000529224 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 PSMD11O00231 422 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
SSH3-206ENST00000529224 GCATO75600 419 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 ALPIP09923 528 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 TNNT1P13805 278 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 TSHRP16473 764 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 GM2AP17900 193 aa13.1□□□□□ -0.31
SSH3-206ENST00000529224 COMTP21964 271 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms