RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 PCDH12Q9NPG4 1184 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 ARGLU1Q9NWB6 273 aaPredicted RBP8.22□□□□□ -1.09
PABPC4-223ENST00000529216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
PABPC4-223ENST00000529216 B4GALT6Q9UBX8 382 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 SOX13Q9UN79 622 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 CHMP2BQ9UQN3 213 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 SPO11Q9Y5K1 396 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 MAD1L1Q9Y6D9 718 aa8.22□□□□□ -1.09
PABPC4-223ENST00000529216 TCF20Q9UGU0 1960 aaKnown RBP8.21□□□□□ -1.09
PABPC4-223ENST00000529216 C1orf232A0A0U1RR37 186 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 A0A1W2PP55 124 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 C2orf81A6NN90 581 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PSMD11O00231 422 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PLRG1O43660 514 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 LDB2O43679 373 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SPAG6O75602 509 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 RNASEH2AO75792 299 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 USP1O94782 785 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PDGFBP01127 241 aaPredicted RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 IGLV3-19P01714 112 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PRKCGP05129 697 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 POLBP06746 335 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 DCNP07585 359 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 GSTA2P09210 222 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PIRTP0C851 137 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 H2AFXP16104 143 aaPredicted RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 LHCGRP22888 699 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PSMA3P25788 255 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 HMGCLP35914 325 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ZNF140P52738 457 aaPredicted RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 FAM193AP78312 1265 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ACVR1Q04771 509 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 RALGDSQ12967 914 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SEPT6Q14141 434 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ARHGEF7Q14155 803 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 FRG1Q14331 258 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 CRYMQ14894 314 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TMEM52BQ4KMG9 183 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 LRRC73Q5JTD7 316 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SPDYCQ5MJ68 293 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TSTD2Q5T7W7 516 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 STEAP4Q687X5 459 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 LRRC66Q68CR7 880 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 CRTC1Q6UUV9 634 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 KIAA1324Q6UXG2 1013 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TRMT10CQ7L0Y3 403 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TMEM135Q86UB9 458 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 RASSF3Q86WH2 238 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 IGDCC3Q8IVU1 814 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TTC30BQ8N4P2 665 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 HDDC3Q8N4P3 179 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 MREGQ8N565 214 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PYROXD1Q8WU10 500 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 STYXQ8WUJ0 223 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 HMGB4Q8WW32 186 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SMIM14Q96QK8 99 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 HHIPQ96QV1 700 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 OMDQ99983 421 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 GPR63Q9BZJ6 419 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SLC6A17Q9H1V8 727 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 CDC42EP4Q9H3Q1 356 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 CHRAC1Q9NRG0 131 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 TREX1Q9NSU2 369 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 POLR3BQ9NW08 1133 aaPredicted RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 C2orf42Q9NWW7 574 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 FBXL12Q9NXK8 326 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 NINJ2Q9NZG7 142 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 USP36Q9P275 1121 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 BCCIPQ9P287 314 aaKnown RBP eCLIP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 SERGEFQ9UGK8 458 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ZC3H7BQ9UGR2 993 aaKnown RBP8.21□□□□□ -1.1
PABPC4-223ENST00000529216 EBF1Q9UH73 591 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 NCKAP1Q9Y2A7 1128 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 PKP3Q9Y446 797 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 FADS3Q9Y5Q0 445 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ARL5AQ9Y689 179 aa8.21□□□□□ -1.1
PABPC4-223ENST00000529216 ZCWPW2A0A1B0GU75 182 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 RGSL1A5PLK6 1076 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 K7ESF4 209 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 PLK4O00444 970 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 AURKAO14965 403 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 TSPAN6O43657 245 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 PI15O43692 258 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 ZNF217O75362 1048 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 ABHD2P08910 425 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 ELFN1P0C7U0 828 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 PAMP19021 973 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-223ENST00000529216 HOXA6P31267 233 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 HADHAP40939 763 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 CXCL12P48061 93 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 TPMTP51580 245 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 STC1P52823 247 aa8.2□□□□□ -1.1
PABPC4-223ENST00000529216 PMS2P54278 862 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms