RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 ABI3BPQ7Z7G0 1075 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 PHLDB2Q86SQ0 1253 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 PRPF39Q86UA1 669 aaKnown RBP7.16□□□□□ -1.26
ITGB1-218ENST00000528877 TBC1D3Q8IZP1 549 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-218ENST00000528877 ARMC10Q8N2F6 343 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 NIPA2Q8N8Q9 360 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 DENND6BQ8NEG7 585 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 GRIN3AQ8TCU5 1115 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 HCAR2Q8TDS4 363 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 ASB12Q8WXK4 309 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF653Q96CK0 615 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 ARHGEF26Q96DR7 871 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 HMCESQ96FZ2 354 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 GDAP1L1Q96MZ0 367 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 LENG8Q96PV6 779 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-218ENST00000528877 PEBP4Q96S96 227 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 SPON2Q9BUD6 331 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 MAGEB5Q9BZ81 275 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 KLC2Q9H0B6 622 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 DNAI1Q9UI46 699 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 CAPN11Q9UMQ6 739 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 APOBEC2Q9Y235 224 aaKnown RBP7.16□□□□□ -1.26
ITGB1-218ENST00000528877 PCDHGA1Q9Y5H4 931 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 FADS3Q9Y5Q0 445 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 ZFYVE26Q68DK2 2539 aa7.16□□□□□ -1.26
ITGB1-218ENST00000528877 TMEM238LA0A1B0GVL6 79 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 A0A1W2PQU0 124 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 RASA4BC9J798 803 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 AREL1O15033 823 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 RASA4O43374 803 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 TSPAN6O43657 245 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 HYAL3O43820 417 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 CREB3O43889 395 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 PRAMEF11O60813 436 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 POP4O95707 220 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 CAPNS1P04632 268 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 GYPCP04921 128 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SERPING1P05155 500 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 CDK4P11802 303 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 PSMA2P25787 234 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 AKT2P31751 481 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 PREPP48147 710 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SUOXP51687 545 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 UBASH3AP57075 661 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 RPS21P63220 83 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ST3GAL2Q16842 350 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SPRED3Q2MJR0 410 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SKOR2Q2VWA4 1001 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 POM121L1PQ3SYA9 428 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ZNF805Q5CZA5 627 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ERMARDQ5T6L9 678 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SCYL2Q6P3W7 929 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 RFX8Q6ZV50 586 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SPATS2Q86XZ4 545 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 SNRNP25Q9BV90 132 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 YIPF2Q9BWQ6 316 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 CPEB1Q9BZB8 566 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 TM6SF2Q9BZW4 377 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 TRIM7Q9C029 511 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ZDHHC6Q9H6R6 413 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 MRPL47Q9HD33 250 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 HECAQ9UBI9 543 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 DKK3Q9UBP4 350 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 LHX3Q9UBR4 397 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 CNOT8Q9UFF9 292 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 KLK13Q9UKR3 277 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ZFR2Q9UPR6 939 aaKnown RBP7.15□□□□□ -1.26
ITGB1-218ENST00000528877 BTBD3Q9Y2F9 522 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 ACTL7AQ9Y615 435 aa7.15□□□□□ -1.26
ITGB1-218ENST00000528877 FAM208BQ5VWN6 2430 aa7.15□□□□□ -1.27
ITGB1-218ENST00000528877 C16orf96A6NNT2 1141 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 A6NNZ2 444 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 GOLGA6L19H0YKK7 550 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 LOC400499M0QZD8 3231 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 EEF2KO00418 725 aaKnown RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 TOR1BO14657 336 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 PRPSAP2O60256 369 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 RNF8O76064 485 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 IGSF6O95976 241 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 TOP3BO95985 862 aaKnown RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 CYP1A2P05177 515 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 TPM3P06753 285 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 C1QTNF9P0C862 333 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 PRLRP16471 622 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 SPINK2P20155 84 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 MIPP30301 263 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 MAT2AP31153 395 aaKnown RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 CSNK1DP48730 415 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 SLC25A11Q02978 314 aaKnown RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 ILKQ13418 452 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 TRIM14Q14142 442 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 FGL2Q14314 439 aa7.14□□□□□ -1.27
ITGB1-218ENST00000528877 PIGHQ14442 188 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 RFTN1Q14699 578 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-218ENST00000528877 GRM3Q14832 879 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms