RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HYOU1Q9Y4L1 999 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 HEY1Q9Y5J3 304 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 LRP4O75096 1905 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 KNTC1P50748 2209 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 K7ESM1 405 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 PPP1R12AO14974 1030 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 AQP9O43315 295 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 JCHAINP01591 159 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 HLA-DQB2P05538 268 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 PDHA1P08559 390 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 TNNT1P13805 278 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 GM2AP17900 193 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 E2F1Q01094 437 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 DSC2Q02487 901 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 PPARDQ03181 441 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 DNAJC3Q13217 504 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 NFATC4Q14934 902 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 ACOX1Q15067 660 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 CNGA3Q16281 694 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 TFDP3Q5H9I0 405 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 FAXCQ5TGI0 409 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 ESRP1Q6NXG1 681 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 USP45Q70EL2 814 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 CACTIN-AS1Q8N1I8 211 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 SDR16C5Q8N3Y7 309 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZNF548Q8NEK5 533 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 SLC13A1Q9BZW2 595 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 EVA1BQ9NVM1 165 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 NCKIPSDQ9NZQ3 722 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 DNPEPQ9ULA0 475 aa12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 GOLGA4Q13439 2230 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-209ENST00000528230 MYLKQ15746 1914 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 A8MX80 341 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 C1QTNF9BB2RNN3 333 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 KCNK1O00180 336 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PDE2AO00408 941 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TNFRSF10CO14798 259 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 FFAR2O15552 330 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PJA2O43164 708 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 RASGRP1O95267 797 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PRLP01236 227 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PCCBP05166 539 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 CKMT1AP12532 417 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZNF30P17039 623 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TGM2P21980 687 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 KELP23276 732 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TEAD1P28347 426 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 DUSP3P51452 185 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 HK3P52790 923 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 KIAA1024LP59773 190 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 AP1B1Q10567 949 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 IHHQ14623 411 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PNCKQ6P2M8 343 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 LVRNQ6Q4G3 990 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 ENPP7Q6UWV6 458 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 RAD9BQ6WBX8 426 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 KDM7AQ6ZMT4 941 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 SPOCD1Q6ZMY3 1216 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 NLRP8Q86W28 1048 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TXLNBQ8N3L3 684 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 FSTL5Q8N475 847 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 CNTD1Q8N815 330 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 LMX1AQ8TE12 382 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 RBM41Q96IZ5 413 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 APOLD1Q96LR9 279 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 WDR92Q96MX6 357 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 APOBEC3BQ9UH17 382 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 PNMA8BQ9ULN7 279 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 TFR2Q9UP52 801 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 REXO2Q9Y3B8 237 aaKnown RBP12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 DGKBQ9Y6T7 804 aa12.13□□□□□ -0.47
TRAPPC4-209ENST00000528230 ACACBO00763 2458 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 A0A0J9YYE9 177 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 NPIPB15A6NHN6 443 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 LMO7DNF2Z398 122 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 CACNB4O00305 520 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 CST8O60676 142 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TNFP01375 233 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TRBC1P01850 177 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 GP1BAP07359 652 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TSHRP16473 764 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 LHCGRP22888 699 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 HNF1BP35680 557 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 VAV2P52735 878 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 EPHB1P54762 984 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms