RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HOXD9P28356 352 aaPredicted RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 KCNQ1P51787 676 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 GPNMBQ14956 572 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 MAPRE2Q15555 327 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TMEM198Q66K66 360 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TMEM207Q6UWW9 146 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 SDCCAG8Q86SQ7 713 aaPredicted RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 ISCA2Q86U28 154 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CRIPAKQ8N1N5 446 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 BLOC1S5Q8TDH9 187 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 DNAJC1Q96KC8 554 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 ASB2Q96Q27 587 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 PSKH2Q96QS6 385 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TRIB3Q96RU7 358 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 HMX1Q9NP08 348 aaPredicted RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 ZDHHC7Q9NXF8 308 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 ARIH1Q9Y4X5 557 aaPredicted RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 KCTD3Q9Y597 815 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TMEM233B4DJY2 109 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 SMIM24O75264 130 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 SORBS2O94875 1100 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 CRTAMO95727 393 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CES1P23141 567 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 SLC6A4P31645 630 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TUFMP49411 452 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 GATMP50440 423 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TYSND1Q2T9J0 566 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 PIGGQ5H8A4 983 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 GPR158Q5T848 1215 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CAPRIN2Q6IMN6 1127 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 OR4L1Q8NH43 312 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CD99L2Q8TCZ2 262 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 RCN3Q96D15 328 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 GSTO2Q9H4Y5 243 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CYP4F12Q9HCS2 524 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 CATSPERZQ9NTU4 200 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 INTS10Q9NVR2 710 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 UTP6Q9NYH9 597 aaKnown RBP15.38■□□□□ 0.05
USH1C-207ENST00000527720 ARL5AQ9Y689 179 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 TANC1Q9C0D5 1861 aa15.38■□□□□ 0.05
USH1C-207ENST00000527720 OR51F1A6NGY5 319 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 PITPNM1O00562 1244 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CASQ2O14958 399 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 KDELR3O43731 214 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CLDN11O75508 207 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 ERFP50548 548 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CDC16Q13042 620 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 ART3Q13508 389 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 SQLEQ14534 574 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 ZNF678Q5SXM1 525 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 SLC8B1Q6J4K2 584 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 LDB1Q86U70 411 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 FBXO22Q8NEZ5 403 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 RHEBL1Q8TAI7 183 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 PLD4Q96BZ4 506 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 NLE1Q9NVX2 485 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 UBA2Q9UBT2 640 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 G3BP2Q9UN86 482 aaKnown RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 CCDC162PA2VCL2 907 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 MAGEA13PA6NCF6 341 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CCL22O00626 93 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 INHAP05111 366 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CHRM1P11229 460 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 CD1DP15813 335 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 PSMA3P25788 255 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 STC1P52823 247 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 GALNT3Q14435 633 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 ZNF423Q2M1K9 1284 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 IL31Q6EBC2 164 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CFAP52Q8N1V2 620 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 GATA6Q92908 595 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 PPP2R3CQ969Q6 453 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CDRT15Q96T59 188 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CINPQ9BW66 212 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 ALG9Q9H6U8 611 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 WDR41Q9HAD4 459 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 SCOCQ9UIL1 159 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 CRYL1Q9Y2S2 319 aa15.37■□□□□ 0.05
USH1C-207ENST00000527720 ZFP37Q9Y6Q3 630 aaPredicted RBP15.37■□□□□ 0.05
USH1C-207ENST00000527720 ANAPC1Q9H1A4 1944 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 A0A0D9SEW6 157 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ILVBLA1L0T0 632 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 H3BNC9 293 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 PEX1O43933 1283 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 OXCT1P55809 520 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 HERVK_113P63132 956 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 STX5Q13190 355 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ZFP1Q6P2D0 407 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ZNF549Q6P9A3 640 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 TMEM154Q6P9G4 183 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 RNF111Q6ZNA4 994 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 CHST9Q7L1S5 443 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 FAM126BQ8IXS8 530 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 LRRC43Q8N309 656 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 PHF21BQ96EK2 531 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 CDKN2AIPNLQ96HQ2 116 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ERVK-6Q9BXR3 956 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms