RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TP53INP2Q8IXH6 220 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 TRIM11Q96F44 468 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 PSKH2Q96QS6 385 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 LRRN3Q9H3W5 708 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 DPEP2Q9H4A9 486 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 CYP4F12Q9HCS2 524 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 CDRT15L2A8MXV6 281 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 PDE2AO00408 941 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 DDX3XO00571 662 aaKnown RBP eCLIP22.45■■□□□ 1.188e-12■■■■□ 21.2
TRAPPC4-208ENST00000527680 PLD2O14939 933 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 AMPD1P23109 780 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 MLLT3P42568 568 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 INHBCP55103 352 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 KIAA1024LP59773 190 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 ARHGEF7Q14155 803 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 ZSCAN23Q3MJ62 389 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 KCTD16Q68DU8 428 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 PNCKQ6P2M8 343 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 B3GNT8Q7Z7M8 397 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 JAMLQ86YT9 394 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 BBS5Q8N3I7 341 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 NSMCE1Q8WV22 266 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 HSPH1Q92598 858 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 LIN37Q96GY3 246 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 ZNF599Q96NL3 588 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 TMEM168Q9H0V1 697 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 WDR26Q9H7D7 661 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 SUDS3Q9H7L9 328 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 FGF22Q9HCT0 170 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 PCDHGC4Q9Y5F7 938 aa22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 COL27A1Q8IZC6 1860 aaPredicted RBP22.45■■□□□ 1.18
TRAPPC4-208ENST00000527680 AGRPO00253 132 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 TRAFD1O14545 582 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 TNFRSF10CO14798 259 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 ITGA2BP08514 1039 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 MYBL1P10243 752 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 NFKBIAP25963 317 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 PDX1P52945 283 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 DPYSQ14117 519 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 SMTNL2Q2TAL5 461 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 BOLA3Q53S33 107 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 TMCO3Q6UWJ1 677 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 CCDC81Q6ZN84 652 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 CYP4V2Q6ZWL3 525 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 CCNJLQ8IV13 435 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 ZNF843Q8N446 348 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 GPR156Q8NFN8 814 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 TMEM74Q96NL1 305 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 BPIFA3Q9BQP9 254 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 LGR4Q9BXB1 951 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 TMEM63CQ9P1W3 806 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 B4GALT6Q9UBX8 382 aa22.44■■□□□ 1.18
TRAPPC4-208ENST00000527680 A0A1W2PQC6 194 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 A0A1W2PQM1 296 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 B4DGG1 531 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 D6RAR5 112 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 SERPINC1P01008 464 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 HOXC4P09017 264 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 JMJD7P0C870 316 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 GLB1P16278 677 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 PCK1P35558 622 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 TRIM23P36406 574 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 PRKCIP41743 596 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 EIF3IQ13347 325 aaKnown RBP22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 CLEC14AQ86T13 490 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 NAP1L5Q96NT1 182 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 LRIT1Q9P2V4 623 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 MGAQ8IWI9 3026 aa22.43■■□□□ 1.18
TRAPPC4-208ENST00000527680 LRP4O75096 1905 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 A0A1W2PQ67 120 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 GOLGA6CA6NDK9 693 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 GOLGA6BA6NDN3 693 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 CAPN8A6NHC0 703 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 GOLGA6DP0CG33 693 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 SLC5A2P31639 672 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 UGT1A5P35504 534 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 HSPA9P38646 679 aaKnown RBP22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 ZNF165P49910 485 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 TSR1Q2NL82 804 aaKnown RBP22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 E4F1Q66K89 784 aaPredicted RBP22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 OGFOD3Q6PK18 319 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 PCSK4Q6UW60 755 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 POLNQ7Z5Q5 900 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 NUS1Q96E22 293 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 NSMCE3Q96MG7 304 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 GOLGA6AQ9NYA3 693 aa22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 ATXN7L1Q9ULK2 861 aaPredicted RBP22.42■■□□□ 1.18
TRAPPC4-208ENST00000527680 CPP00450 1065 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 CYP2A6P11509 494 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 HGFP14210 728 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 IL1R2P27930 398 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 SKOR1P84550 965 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 DPYSL2Q16555 572 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 C14orf28Q4W4Y0 310 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 TDRD12Q587J7 1177 aaKnown RBP22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 CCL4L1Q8NHW4 92 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 WBP1Q96G27 269 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 COQ10AQ96MF6 247 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 NUDCD1Q96RS6 583 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms