RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SLC43A3Q8NBI5 491 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 OR52K2Q8NGK3 314 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 OR13C4Q8NGS5 318 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 BLOC1S5Q8TDH9 187 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 FAR2Q96K12 515 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 EFCAB1Q9HAE3 211 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 A0A0D9SEW6 157 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 CCDC162PA2VCL2 907 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 CFLARO15519 480 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 TLR5O60602 858 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 RNASEH1O60930 286 aaKnown RBP17.62■□□□□ 0.41
USH1C-205ENST00000527020 FGF1P05230 155 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 HLA-DPA1P20036 260 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 IMPDH1P20839 514 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 HOXD9P28356 352 aaPredicted RBP17.62■□□□□ 0.41
USH1C-205ENST00000527020 INHBCP55103 352 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 DUSP4Q13115 394 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 TRIP10Q15642 601 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 C5orf22Q49AR2 442 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 ALG1LQ6GMV1 187 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 FAM45BPQ6NSW5 357 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 GPR150Q8NGU9 434 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 FAM45AQ8TCE6 357 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 GIPC2Q8TF65 315 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 L3HYPDHQ96EM0 354 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 TRIB3Q96RU7 358 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 EML4Q9HC35 981 aaKnown RBP17.62■□□□□ 0.41
USH1C-205ENST00000527020 PSMD13Q9UNM6 376 aa17.62■□□□□ 0.41
USH1C-205ENST00000527020 CCDC189A1A4V9 331 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 CD3EAPO15446 510 aaKnown RBP17.61■□□□□ 0.41
USH1C-205ENST00000527020 PIRTP0C851 137 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 CD1DP15813 335 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 ART3Q13508 389 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 BTG3Q14201 252 aaPredicted RBP17.61■□□□□ 0.41
USH1C-205ENST00000527020 ZNF235Q14590 738 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 ZNF678Q5SXM1 525 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 LGI2Q8N0V4 545 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 RNF148Q8N7C7 305 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 TUBGCP5Q96RT8 1024 aa17.61■□□□□ 0.41
USH1C-205ENST00000527020 DDX50Q9BQ39 737 aaKnown RBP17.61■□□□□ 0.41
USH1C-205ENST00000527020 A0A1W2PQ45 241 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 A0A1W2PQY0 241 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 MOXD2PA6NHM9 499 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 ENPP3O14638 875 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 NBNO60934 754 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 PENKP01210 267 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 EPOP01588 193 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 SLC4A1P02730 911 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 COL6A1P12109 1028 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 ATF6P18850 670 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 XIAPP98170 497 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 NFKB2Q00653 900 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 FLOT2Q14254 428 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 PTK2BQ14289 1009 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 UNC50Q53HI1 259 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 OGFRL1Q5TC84 451 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 FUT10Q6P4F1 479 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 TMEM173Q86WV6 379 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 APLFQ8IW19 511 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 PEX13Q92968 403 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 ABT1Q9ULW3 272 aaKnown RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 ASB3Q9Y575 518 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 PEX1O43933 1283 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 RPP40O75818 363 aaKnown RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 GLP2RO95838 553 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 TSPAN8P19075 237 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 SUOXP51687 545 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 ACBD5Q5T8D3 534 aaPredicted RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 RNF220Q5VTB9 566 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 FOXB2Q5VYV0 432 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 CLEC6AQ6EIG7 209 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 PQLC1Q8N2U9 271 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 OR7D4Q8NG98 312 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 BRSK1Q8TDC3 778 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 PPP1R12CQ9BZL4 782 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 VCX3BQ9H321 246 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
USH1C-205ENST00000527020 COMMD8Q9NX08 183 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 TRAF6Q9Y4K3 522 aa17.6■□□□□ 0.41
USH1C-205ENST00000527020 SLC38A8A6NNN8 435 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 NT5C1B-RDH14C9J2C7 533 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 F5H5T6 163 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 H3BNC9 293 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 FBP2O00757 339 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 ACOT8O14734 319 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 PRSS56P0CW18 603 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 UQCRBP14927 111 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 ME2P23368 584 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 MRPS22P82650 360 aaKnown RBP17.59■□□□□ 0.41
USH1C-205ENST00000527020 SQLEQ14534 574 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 SDCCAG8Q86SQ7 713 aaPredicted RBP17.59■□□□□ 0.41
USH1C-205ENST00000527020 ABI1Q8IZP0 508 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 TMA16Q96EY4 203 aaKnown RBP17.59■□□□□ 0.41
USH1C-205ENST00000527020 ZNF599Q96NL3 588 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 MGME1Q9BQP7 344 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 YIPF3Q9GZM5 350 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 PCDHGA7Q9Y5G6 932 aa17.59■□□□□ 0.41
USH1C-205ENST00000527020 BCAS2O75934 225 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms