RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NKX2-8O15522 239 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 DAPK3O43293 454 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CCP110O43303 1012 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 PALMO75781 387 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ECEL1O95672 775 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 LSM8O95777 96 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 FGF1P05230 155 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 PRKAR1AP10644 381 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 FGF3P11487 239 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 MMP8P22894 467 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CCKBRP32239 447 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 MLLT3P42568 568 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 GNPDA1P46926 289 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 SCNN1BP51168 640 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 RPL7AP62424 266 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 CDR2Q01850 454 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NRG1Q02297 640 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 SRSF1Q07955 248 aaKnown RBP eCLIP6.6□□□□□ -1.35
CD44-221ENST00000526000 PTP4A2Q12974 167 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 EIF3IQ13347 325 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 SERINC3Q13530 473 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CA9Q16790 459 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 INO80DQ53TQ3 878 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 EFHC2Q5JST6 749 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CERCAMQ5T4B2 595 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 PNCKQ6P2M8 343 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 SLC30A9Q6PML9 568 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 RFLNAQ6ZTI6 216 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 MARK2Q7KZI7 788 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NRROSQ86YC3 692 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NRSN1Q8IZ57 195 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 UNC5BQ8IZJ1 945 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.6□□□□□ -1.35
CD44-221ENST00000526000 IL22RA1Q8N6P7 574 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ZDHHC1Q8WTX9 485 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 PDCD6IPQ8WUM4 868 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 CENPIQ92674 756 aaPredicted RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 ART4Q93070 314 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NKD1Q969G9 470 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CCDC74BQ96LY2 380 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 TBATAQ96M53 351 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 SMIM14Q96QK8 99 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 RBM15Q96T37 977 aaKnown RBP eCLIP6.6□□□□□ -1.35
CD44-221ENST00000526000 CTRCQ99895 268 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 SLC25A18Q9H1K4 315 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 OCIAD1Q9NX40 245 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 TMEM9Q9P0T7 183 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 PCSK1NQ9UHG2 260 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NOCTQ9UK39 431 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 FZD10Q9ULW2 581 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ATP8A1Q9Y2Q0 1164 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 TMEM98Q9Y2Y6 226 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 MFHAS1Q9Y4C4 1052 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 B3GALT1Q9Y5Z6 326 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 NAV2Q8IVL1 2488 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 CFAP46Q8IYW2 2715 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 KALRNO60229 2985 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 ASH1LQ9NR48 2969 aaKnown RBP6.6□□□□□ -1.35
CD44-221ENST00000526000 MYO18BQ8IUG5 2567 aa6.6□□□□□ -1.35
CD44-221ENST00000526000 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PRSS38A1L453 326 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 SIGLEC16A6NMB1 481 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 EFCAB7A8K855 629 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TOR1BO14657 336 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PPM1DO15297 605 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 DUX1O43812 170 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PPFIA2O75334 1257 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TPM3P06753 285 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 ELFN1P0C7U0 828 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 LIFP15018 202 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CTPS1P17812 591 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 GM2AP17900 193 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CDK11BP21127 795 aaKnown RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 CD1CP29017 333 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 SOX5P35711 763 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 PTPN9P43378 593 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 NSFP46459 744 aaKnown RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 ARSDP51689 593 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 YBEYP58557 167 aaPredicted RBP6.59□□□□□ -1.35
CD44-221ENST00000526000 TPI1P60174 286 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 BCL2L1Q07817 233 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 RALGDSQ12967 914 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 MTM1Q13496 603 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD44-221ENST00000526000 NCAPHQ15003 741 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 IQCB1Q15051 598 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TCP11X2Q5H9J9 407 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 CDKAL1Q5VV42 579 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 C16orf46Q6P387 395 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 DCUN1D2Q6PH85 259 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 STRADAQ7RTN6 431 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 TRIM74Q86UV6 250 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 DTX1Q86Y01 620 aa6.59□□□□□ -1.35
CD44-221ENST00000526000 SLITRK4Q8IW52 837 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms