RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 COQ10AQ96MF6 247 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 RBM15Q96T37 977 aaKnown RBP eCLIP12.99□□□□□ -0.33
CTSB-209ENST00000525315 CEP41Q9BYV8 373 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 SLC32A1Q9H598 525 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
CTSB-209ENST00000525315 COL5A1P20908 1838 aaPredicted RBP12.98□□□□□ -0.33
CTSB-209ENST00000525315 SPTY2D1-AS1A0A0U1RR47 76 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 NPIPB15A6NHN6 443 aaPredicted RBP12.98□□□□□ -0.33
CTSB-209ENST00000525315 ANKRD66B4E2M5 251 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 H7C0C1 242 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 PSMD11O00231 422 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 RECQL5O94762 991 aaPredicted RBP12.98□□□□□ -0.33
CTSB-209ENST00000525315 RBL1P28749 1068 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 ATP5OP48047 213 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
CTSB-209ENST00000525315 PTSQ03393 145 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 BNIP3Q12983 259 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 PTPRRQ15256 657 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 IRF4Q15306 451 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 CNGA3Q16281 694 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 KANSL1Q7Z3B3 1105 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 NAXDQ8IW45 347 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 ZNF567Q8N184 647 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 TRIB3Q96RU7 358 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 LYSMD1Q96S90 227 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 TRHDEQ9UKU6 1024 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 PCOLCE2Q9UKZ9 415 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 LRP4O75096 1905 aa12.98□□□□□ -0.33
CTSB-209ENST00000525315 SPTBN2O15020 2390 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 GIPC1O14908 333 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 FLRT2O43155 660 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 ALPIP09923 528 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 RBP3P10745 1247 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 CTPS1P17812 591 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 LHCGRP22888 699 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 TRIM23P36406 574 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 NOVA1P51513 510 aaKnown RBP12.97□□□□□ -0.33
CTSB-209ENST00000525315 EPHB1P54762 984 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
CTSB-209ENST00000525315 FZD2Q14332 565 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 INPP5AQ14642 412 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 CDKN3Q16667 212 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 QPCTQ16769 361 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 TPRG1LQ5T0D9 272 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 PSAPL1Q6NUJ1 521 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 KDM7AQ6ZMT4 941 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 USP45Q70EL2 814 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 PID1Q7Z2X4 250 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 PTAR1Q7Z6K3 402 aaPredicted RBP12.97□□□□□ -0.33
CTSB-209ENST00000525315 TECPR1Q7Z6L1 1165 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 TSPAN33Q86UF1 283 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 RAVER1Q8IY67 606 aaKnown RBP12.97□□□□□ -0.33
CTSB-209ENST00000525315 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 BAHD1Q8TBE0 780 aaPredicted RBP12.97□□□□□ -0.33
CTSB-209ENST00000525315 CAMK1GQ96NX5 476 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 SMIM14Q96QK8 99 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 FCRL5Q96RD9 977 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 APOOQ9BUR5 198 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 ADGRE3Q9BY15 652 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 C10orf88Q9H8K7 445 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 USP29Q9HBJ7 922 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 DNPEPQ9ULA0 475 aa12.97□□□□□ -0.33
CTSB-209ENST00000525315 GOLGA6L9A6NEM1 432 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 CAPN8A6NHC0 703 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 CSF2P04141 144 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 ZNF30P17039 623 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 EPHA8P29322 1005 aaPredicted RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 IL9RQ01113 521 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 CDK18Q07002 472 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 MTM1Q13496 603 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 PDE1CQ14123 709 aaPredicted RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 ARHGEF7Q14155 803 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 PTK2BQ14289 1009 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 ACOX1Q15067 660 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 ESRP1Q6NXG1 681 aaKnown RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 DARS2Q6PI48 645 aaKnown RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 HSD11B1LQ7Z5J1 315 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 GLRX5Q86SX6 157 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 NLRP8Q86W28 1048 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 GATAD2AQ86YP4 633 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 CDKL3Q8IVW4 592 aaPredicted RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 PLA2G15Q8NCC3 412 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 TRIM58Q8NG06 486 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 RHBDD1Q8TEB9 315 aa12.96□□□□□ -0.33
CTSB-209ENST00000525315 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.33
CTSB-209ENST00000525315 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms