RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 HES3Q5TGS1 186 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 ARHGAP36Q6ZRI8 547 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 ERN2Q76MJ5 926 aaKnown RBP12.29□□□□□ -0.44
CHKA-203ENST00000525155 ABI3BPQ7Z7G0 1075 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 CDKL3Q8IVW4 592 aaPredicted RBP12.29□□□□□ -0.44
CHKA-203ENST00000525155 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 SLC35F6Q8N357 371 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 NETO2Q8NC67 525 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 ZNF641Q96N77 438 aaPredicted RBP12.29□□□□□ -0.44
CHKA-203ENST00000525155 LGMNQ99538 433 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 KLF6Q99612 283 aaPredicted RBP12.29□□□□□ -0.44
CHKA-203ENST00000525155 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 TM6SF2Q9BZW4 377 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 POLR1EQ9GZS1 481 aaKnown RBP12.29□□□□□ -0.44
CHKA-203ENST00000525155 ATP13A3Q9H7F0 1226 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
CHKA-203ENST00000525155 CTAGE9A4FU28 777 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 USP27XA6NNY8 438 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 H7C0C1 242 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 KRIT1O00522 736 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 CASC3O15234 703 aaKnown RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 YKT6O15498 198 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 TCP1P17987 556 aaKnown RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 ITIH2P19823 946 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 CA4P22748 312 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 ACP1P24666 158 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 NFKBIAP25963 317 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 NUDT1P36639 197 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 ATP5OP48047 213 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 SUOXP51687 545 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 EIF3EP60228 445 aaKnown RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 ADCY2Q08462 1091 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 SLC10A7Q0GE19 358 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 KLF1Q13351 362 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 RTP5Q14D33 572 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 PRKD1Q15139 912 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 LLGL1Q15334 1064 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 SLC45A4Q5BKX6 768 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 NPNTQ6UXI9 565 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 SRLQ86TD4 932 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 TSEN2Q8NCE0 465 aaKnown RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 ACTL9Q8TC94 416 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 GRIN3AQ8TCU5 1115 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 PPP1R2P1Q96PQ5 205 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 QKIQ96PU8 341 aaKnown RBP eCLIP12.28□□□□□ -0.443e-7■■■■□ 24.8
CHKA-203ENST00000525155 NUDCD1Q96RS6 583 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 MGME1Q9BQP7 344 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■■□□□ 11.4
CHKA-203ENST00000525155 LHX3Q9UBR4 397 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 TRHDEQ9UKU6 1024 aa12.28□□□□□ -0.44
CHKA-203ENST00000525155 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 TTC7AQ9ULT0 858 aaPredicted RBP12.28□□□□□ -0.44
CHKA-203ENST00000525155 MGAQ8IWI9 3026 aa12.27□□□□□ -0.44
CHKA-203ENST00000525155 CFAP69A5D8W1 941 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 CEP104O60308 925 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 PIAS2O75928 621 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 MAP3K6O95382 1288 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 JCHAINP01591 159 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 RBP3P10745 1247 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 ITGB7P26010 798 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 SERPINA4P29622 427 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 ABL2P42684 1182 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 SCNN1BP51168 640 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 POLR2LP62875 67 aaKnown RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 BCL2L1Q07817 233 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 ITKQ08881 620 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 FZD2Q14332 565 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 INAVAQ3KP66 663 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 TEX44Q53QW1 395 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 ZNF805Q5CZA5 627 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 CFAP58Q5T655 872 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 DARS2Q6PI48 645 aaKnown RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 BRAT1Q6PJG6 821 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 GDPD4Q6W3E5 623 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 Q6ZSR6 202 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 ZC3H18Q86VM9 953 aaKnown RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 ZSCAN30Q86W11 494 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 OXR1Q8N573 874 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 DCBLD1Q8N8Z6 715 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 OR6K2Q8NGY2 324 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 HTR3CQ8WXA8 447 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 RAB7BQ96AH8 199 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 IL12RB2Q99665 862 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 NAPGQ99747 312 aaPredicted RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 SLC17A9Q9BYT1 436 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 NT5MQ9NPB1 228 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 SAE1Q9UBE0 346 aaPredicted RBP12.27□□□□□ -0.45
CHKA-203ENST00000525155 DKK3Q9UBP4 350 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 SNX12Q9UMY4 172 aa12.27□□□□□ -0.45
CHKA-203ENST00000525155 HS3ST3A1Q9Y663 406 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms