RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 ACTL7AQ9Y615 435 aa8.45□□□□□ -1.06
DEPDC1-205ENST00000525124 SETXQ7Z333 2677 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 SERTM1A2A2V5 107 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CPED1A4D0V7 1026 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 FAM72CH0Y354 149 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 J3QKU1 62 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 KRIT1O00522 736 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 YY2O15391 372 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 TMCC1O94876 653 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 C6P13671 934 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 PNLIPP16233 465 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 TSHRP16473 764 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CHRNB2P17787 502 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 GKP32189 559 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 EIF4A3P38919 411 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 HK3P52790 923 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 PDX1P52945 283 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ADKP55263 362 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 HDAC4P56524 1084 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 JAM2P57087 298 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 PPARDQ03181 441 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 SERINC3Q13530 473 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 SPIDRQ14159 915 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CDO1Q16878 200 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 C15orf59Q2T9L4 293 aaPredicted RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 KLHL40Q2TBA0 621 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 PARP15Q460N3 678 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 TAF1BQ53T94 588 aaPredicted RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ARHGAP40Q5TG30 622 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 FAM72AQ5TYM5 149 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 FAM72DQ6L9T8 149 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 RWDD4Q6NW29 188 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 TTC7BQ86TV6 843 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 FAM72BQ86X60 149 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 DNAAF5Q86Y56 855 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 RBFAQ8N0V3 343 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ARL10Q8N8L6 244 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 RTL3Q8N8U3 475 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 C3orf20Q8ND61 904 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ATL2Q8NHH9 583 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 SCG3Q8WXD2 468 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ATXN7L3BQ96GX2 97 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 NAF1Q96HR8 494 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CCDC3Q9BQI4 270 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 EDEM3Q9BZQ6 932 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CLSTN2Q9H4D0 955 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 CPNE5Q9HCH3 593 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 DONSONQ9NYP3 566 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 PADI4Q9UM07 663 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 ITM2BQ9Y287 266 aa8.44□□□□□ -1.06
DEPDC1-205ENST00000525124 TCRBV5S1A1TA0A578 114 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 SIGLEC16A6NMB1 481 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 B8ZZF3 427 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 MUSKO15146 869 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 BUB1O43683 1085 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 MMP20O60882 483 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RASGRP1O95267 797 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 CALB1P05937 261 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 HOXC4P09017 264 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 KRT3P12035 628 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 GPD1P21695 349 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 CCKBRP32239 447 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 SOX5P35711 763 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 CSNK1DP48730 415 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RHOAP61586 193 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 MTM1Q13496 603 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 NFATC4Q14934 902 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 LRRC14Q15048 493 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 DPCR1Q3MIW9 517 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 FAXCQ5TGI0 409 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 SLFN11Q7Z7L1 901 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 VPS36Q86VN1 386 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 GKN2Q86XP6 184 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 PHF13Q86YI8 300 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 UMODL1-AS1Q8N2C9 162 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RYBPQ8N488 228 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 CCDC185Q8N715 623 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 GPR156Q8NFN8 814 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 OR6K2Q8NGY2 324 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 JOSD2Q8TAC2 188 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 GPT2Q8TD30 523 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 FAM172AQ8WUF8 416 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 SLC20A1Q8WUM9 679 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 TMEM159Q96B96 161 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 MED8Q96G25 268 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 HSH2DQ96JZ2 352 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 ZNF641Q96N77 438 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 TUBGCP5Q96RT8 1024 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RBM15Q96T37 977 aaKnown RBP eCLIP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 B3GNT4Q9C0J1 378 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 TCEAL2Q9H3H9 227 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 CATSPERBQ9H7T0 1116 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 PDFQ9HBH1 243 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 BRD7Q9NPI1 651 aa8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 MBNL1Q9NR56 388 aaKnown RBP8.43□□□□□ -1.06
DEPDC1-205ENST00000525124 SAMSN1Q9NSI8 373 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms