RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 PRKCGP05129 697 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 TFE3P19532 575 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 ELAVL4P26378 380 aaKnown RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 CD1CP29017 333 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 TSPAN7P41732 249 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 STAT1P42224 750 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 ARSDP51689 593 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 KRT85P78386 507 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 PTK2Q05397 1052 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 PNOCQ13519 176 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 GRM3Q14832 879 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 SLC25A52Q3SY17 297 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 TCTN3Q6NUS6 607 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 NYAP1Q6ZVC0 841 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 MAMDC2Q7Z304 686 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 ZNF397Q8NF99 534 aaPredicted RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 CCL4L1Q8NHW4 92 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 FUBP1Q96AE4 644 aaKnown RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 CTRCQ99895 268 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 ZPBPQ9BS86 351 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 MAGEH1Q9H213 219 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 WDR26Q9H7D7 661 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 CARS2Q9HA77 564 aaKnown RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 PPARGC1AQ9UBK2 798 aaKnown RBP9.35□□□□□ -0.91
PTPN12-216ENST00000523952 POLHQ9Y253 713 aa9.35□□□□□ -0.91
PTPN12-216ENST00000523952 PRSS38A1L453 326 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PIGNO95427 931 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 CD160O95971 181 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 ELFN1P0C7U0 828 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 THRAP10827 490 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 CCNB1P14635 433 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 RAPGEF1Q13905 1077 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 ERV3-1Q14264 604 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 UGP2Q16851 508 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 OTUD1Q5VV17 481 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 TMEM71Q6P5X7 295 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 SLC30A9Q6PML9 568 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 ZNF438Q7Z4V0 828 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 FAM131BQ86XD5 332 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 SRRM1Q8IYB3 904 aaKnown RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 ESX1Q8N693 406 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PLA2G15Q8NCC3 412 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 OR10G6Q8NH81 332 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 CASKIN2Q8WXE0 1202 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 RTP4Q96DX8 246 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 MOCOSQ96EN8 888 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PGAP3Q96FM1 320 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 EXOC2Q96KP1 924 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 SLC29A3Q9BZD2 475 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PHPT1Q9NRX4 125 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 SPATS2LQ9NUQ6 558 aaKnown RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 TAAR2Q9P1P5 351 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 HOOK1Q9UJC3 728 aaKnown RBP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 PCDHGC3Q9UN70 934 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPN12-216ENST00000523952 KCNMB2Q9Y691 235 aa9.34□□□□□ -0.91
PTPN12-216ENST00000523952 IGHV1OR21-1A0A087WYE8 117 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GOLGA6CA6NDK9 693 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GOLGA6BA6NDN3 693 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GOLGA8SH3BPF8 625 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 I6L893 689 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-216ENST00000523952 KDELR3O43731 214 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 SEMA7AO75326 666 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 KATNA1O75449 491 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 STK17BO94768 372 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 FGF1P05230 155 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GOLGA6DP0CG33 693 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 RHOQP17081 205 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 COL8A1P27658 744 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-216ENST00000523952 TNFRSF8P28908 595 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 DLSTP36957 453 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 DCTP40126 519 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GNPDA1P46926 289 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 GPLD1P80108 840 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 NR1D2Q14995 579 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 ACOX1Q15067 660 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 AGERQ15109 404 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 PTPN20Q4JDL3 420 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-216ENST00000523952 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 KCTD16Q68DU8 428 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 BRAT1Q6PJG6 821 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 DNAAF5Q86Y56 855 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 CREBRFQ8IUR6 639 aa9.33□□□□□ -0.92
PTPN12-216ENST00000523952 PRR7Q8TB68 274 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms