RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 E4F1Q66K89 784 aaPredicted RBP12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 NLRP8Q86W28 1048 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 C17orf82Q86X59 251 aaPredicted RBP12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 NIPA2Q8N8Q9 360 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 PCDH19Q8TAB3 1148 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 B3GNT4Q9C0J1 378 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 SP110Q9HB58 689 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
TOP1MT-217ENST00000523417 LOC400499M0QZD8 3231 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 BPTFQ12830 3046 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 A0A1W2PQJ5 194 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 A0A1W2PQM1 296 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TMEM202A6NGA9 273 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 H3BRJ5 948 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 DFFAO00273 331 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 NUDT21O43809 227 aaKnown RBP12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 MAFKO60675 156 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 ELFN1P0C7U0 828 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 NFKBIAP25963 317 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 ZNF165P49910 485 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 CCL7P80098 99 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 IQCB1Q15051 598 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 C3orf38Q5JPI3 329 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 CERCAMQ5T4B2 595 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 HGSNATQ68CP4 663 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 KCTD16Q68DU8 428 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 RD3Q7Z3Z2 195 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TP53INP2Q8IXH6 220 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 KYQ8NBH2 561 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 GPBAR1Q8TDU6 330 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 OR1E3Q8WZA6 343 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TMEM159Q96B96 161 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 SCRN2Q96FV2 425 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TMEM74Q96NL1 305 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 GFM1Q96RP9 751 aaKnown RBP12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 MGME1Q9BQP7 344 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 PHTF1Q9UMS5 762 aa12.68□□□□□ -0.38
TOP1MT-217ENST00000523417 RP1P56715 2156 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 D6RAR5 112 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 K7ENP7 123 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PSMD11O00231 422 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PLD2O14939 933 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 NVLO15381 856 aaKnown RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 KLK10O43240 276 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 NOBOXO60393 691 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 TNFSF15O95150 251 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PRKCGP05129 697 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PCCBP05166 539 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 RARAP10276 462 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 AMPD1P23109 780 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CES1P23141 567 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 IL4RP24394 825 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PBX1P40424 430 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 ARL4AP40617 200 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 DPTQ07507 201 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CLPPQ16740 277 aaPredicted RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CRTC1Q6UUV9 634 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 NYAP1Q6ZVC0 841 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 TEX26Q8N6G2 289 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 FATE1Q969F0 183 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CCDC74AQ96AQ1 378 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 IQCDQ96DY2 449 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CSPG4P5Q96PW8 444 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 MCCC1Q96RQ3 725 aaPredicted RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 LGR4Q9BXB1 951 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 STRADBQ9C0K7 418 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 ETNK2Q9NVF9 386 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 TRNAU1APQ9NX07 287 aaKnown RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 B4GALT6Q9UBX8 382 aa12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 COL27A1Q8IZC6 1860 aaPredicted RBP12.67□□□□□ -0.38
TOP1MT-217ENST00000523417 CASC3O15234 703 aaKnown RBP12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 FZD6O60353 706 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 CYP1A2P05177 515 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 CEACAM5P06731 702 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 MYCLP1P12525 358 aaPredicted RBP12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 SKILP12757 684 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 VIPR1P32241 457 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 UGT1A5P35504 534 aa12.66□□□□□ -0.38
TOP1MT-217ENST00000523417 INHBCP55103 352 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms