RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 EVPLQ92817 2033 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 RPS10-NUDT3A0A1W2PQS6 291 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 SYNDIG1LA6NDD5 238 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 BECN2A8MW95 431 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 B4DGG1 531 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 USP17L23D6RBM5 183 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 TAF4O00268 1085 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 BCAT2O15382 392 aaPredicted RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 SEC14L5O43304 696 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 DKC1O60832 514 aaKnown RBP eCLIP5.09□□□□□ -1.59
SKP1-211ENST00000523359 HOXB2P14652 356 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 ITGAXP20702 1163 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 PSMA4P25789 261 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 NFKBIAP25963 317 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 KIF5BP33176 963 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 KRT20P35900 424 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 GABRB2P47870 512 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 RFX5P48382 616 aaPredicted RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 ZP1P60852 638 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 OLR1P78380 273 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 PLIN5Q00G26 463 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 ALG11Q2TAA5 492 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 COL28A1Q2UY09 1125 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 MB21D2Q8IYB1 491 aaPredicted RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 ADSSL1Q8N142 457 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 MIGA1Q8NAN2 632 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 SNAPC3Q92966 411 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 SMARCE1Q969G3 411 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 INTS12Q96CB8 462 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 ZNF48Q96MX3 618 aaPredicted RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 BARD1Q99728 777 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 FAM234AQ9H0X4 552 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 PLEKHA4Q9H4M7 779 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 CATSPERBQ9H7T0 1116 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 SCPEP1Q9HB40 452 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 PLAC1Q9HBJ0 212 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 DCAF16Q9NXF7 216 aa5.09□□□□□ -1.59
SKP1-211ENST00000523359 LIMA1Q9UHB6 759 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 LSM4Q9Y4Z0 139 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 SRPRBQ9Y5M8 271 aaKnown RBP5.09□□□□□ -1.59
SKP1-211ENST00000523359 KDM4EB2RXH2 506 aaPredicted RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 EIF3CLB5ME19 914 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 MS4A18H0YCH9 400 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 CPLX1O14810 134 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 TIPRLO75663 272 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 CCNDBP1O95273 360 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 SCGB1D1O95968 90 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 TPM2P07951 284 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ETFAP13804 333 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 GNLYP22749 145 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 MAPK4P31152 587 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 SHMT1P34896 483 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ARL3P36405 182 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 CLNS1AP54105 237 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 CEBPZQ03701 1054 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 ITGADQ13349 1161 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 FRG1Q14331 258 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 MED22Q15528 200 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 MEA1Q16626 185 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 TCTN1Q2MV58 587 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 LEXMQ3ZCV2 418 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ITPRIPL1Q6GPH6 555 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 FBXO46Q6PJ61 603 aaPredicted RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 LCTLQ6UWM7 567 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 MON1BQ7L1V2 547 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 KRT74Q7RTS7 529 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 PATL1Q86TB9 770 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 SFTPA2Q8IWL1 248 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ARL10Q8N8L6 244 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 SNX21Q969T3 373 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ATP6V1E2Q96A05 226 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ZBTB9Q96C00 473 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 HMCESQ96FZ2 354 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 VCPIP1Q96JH7 1222 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 ITPAQ9BY32 194 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 TKTL2Q9H0I9 626 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 KIF9Q9HAQ2 790 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 MAGEE1Q9HCI5 957 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 BPIFA1Q9NP55 256 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 DDX4Q9NQI0 724 aaKnown RBP5.08□□□□□ -1.6
SKP1-211ENST00000523359 CYSLTR2Q9NS75 346 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 DIAPH3Q9NSV4 1193 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 HAO1Q9UJM8 370 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 INSL5Q9Y5Q6 135 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 KCNE2Q9Y6J6 123 aa5.08□□□□□ -1.6
SKP1-211ENST00000523359 FAM237BA0A1B0GVD1 139 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 TRIM64A6NGJ6 449 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 TRIM64BA6NI03 449 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 TNFRSF13BO14836 293 aaPredicted RBP5.07□□□□□ -1.6
SKP1-211ENST00000523359 PAGE4O60829 102 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 ZBED4O75132 1171 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 BMP15O95972 392 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 LCATP04180 440 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 CDAP32320 146 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 PIP4K2AP48426 406 aaPredicted RBP5.07□□□□□ -1.6
SKP1-211ENST00000523359 EIF4A2Q14240 407 aaKnown RBP5.07□□□□□ -1.6
SKP1-211ENST00000523359 FGFBP1Q14512 234 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 HNF4GQ14541 408 aa5.07□□□□□ -1.6
SKP1-211ENST00000523359 PSMD6Q15008 389 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms