RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TMCO4Q5TGY1 634 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 HGSNATQ68CP4 663 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 KCTD16Q68DU8 428 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 LIPIQ6XZB0 460 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 POLNQ7Z5Q5 900 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 GKN2Q86XP6 184 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 SPACA3Q8IXA5 215 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 LSMEM2Q8N112 164 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 BBS5Q8N3I7 341 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 FSTL5Q8N475 847 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 KYQ8NBH2 561 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 FAM46DQ8NEK8 389 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 ATL2Q8NHH9 583 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 FUBP1Q96AE4 644 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 FCRL3Q96P31 734 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CSPG4P5Q96PW8 444 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 PSKH2Q96QS6 385 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CYP4F12Q9HCS2 524 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 IFNKQ9P0W0 207 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 B4GALT6Q9UBX8 382 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 GCN1Q92616 2671 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 A0A087X0T9 212 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 A0A0U1RQS6 177 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 PMS2P1A4D2B8 440 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 MYO1FO00160 1098 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 KLK10O43240 276 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 MAP3K6O95382 1288 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 CPP00450 1065 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 FAM228BP0C875 321 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNF135P52742 658 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 PCBP4P57723 403 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 AP1S1P61966 158 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZBED6P86452 979 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 MTM1Q13496 603 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 DSG2Q14126 1118 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 SPIDRQ14159 915 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 DPYSL2Q16555 572 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 FIGNQ5HY92 759 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZFYVE27Q5T4F4 411 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 MARC1Q5VT66 337 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 DPPA4Q7L190 304 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 SDR16C5Q8N3Y7 309 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 PGBD5Q8N414 524 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ARL10Q8N8L6 244 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 KCTD6Q8NC69 237 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNF248Q8NDW4 579 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 OR56A4Q8NGH8 313 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 OR1E3Q8WZA6 343 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 NAT6Q93015 286 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 CCDC74AQ96AQ1 378 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 PDXPQ96GD0 296 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 LGR4Q9BXB1 951 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 TMEM168Q9H0V1 697 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 DPEP2Q9H4A9 486 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 EPB41L5Q9HCM4 733 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 NT5MQ9NPB1 228 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 CAPN11Q9UMQ6 739 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 TTLL3Q9Y4R7 772 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 ENTPD2Q9Y5L3 495 aa10.27□□□□□ -0.77
CTNNA1-235ENST00000522730 A0A1W2PQJ5 194 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 B4DGG1 531 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 TRAFD1O14545 582 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 MAFKO60675 156 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 TNFSF15O95150 251 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 PRB1P04280 392 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 CYP1A2P05177 515 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 RPLP0P05388 317 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 CD48P09326 243 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 KELP23276 732 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 VIPR1P32241 457 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 MMP13P45452 471 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 FOXK1P85037 733 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 TLE3Q04726 772 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 ARHGEF7Q14155 803 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 HADHQ16836 314 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 ATP13A4Q4VNC1 1196 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 BROXQ5VW32 411 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 PNCKQ6P2M8 343 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 ALKBH5Q6P6C2 394 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 LVRNQ6Q4G3 990 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 SARM1Q6SZW1 724 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 HSD11B1LQ7Z5J1 315 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 CPNE8Q86YQ8 564 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 SFTPA2Q8IWL1 248 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 PELI3Q8N2H9 469 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 CCL4L1Q8NHW4 92 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 KCNE4Q8WWG9 221 aa10.26□□□□□ -0.77
CTNNA1-235ENST00000522730 SYN2Q92777 582 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms