RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TTC30BQ8N4P2 665 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 HDDC3Q8N4P3 179 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 HCAR2Q8TDS4 363 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 ANKRD7Q92527 254 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 CLDN23Q96B33 292 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 ZBTB9Q96C00 473 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 PPP1R16AQ96I34 528 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 MRGPRX1Q96LB2 322 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 MCCC1Q96RQ3 725 aaPredicted RBP13.42□□□□□ -0.26
CLK4-210ENST00000522136 MFSD1Q9H3U5 465 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 VPS37BQ9H9H4 285 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 ARFGAP3Q9NP61 516 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 CD93Q9NPY3 652 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 DYRK4Q9NR20 520 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 IL1RAPL1Q9NZN1 696 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 RPS6KL1Q9Y6S9 549 aa13.42□□□□□ -0.26
CLK4-210ENST00000522136 C1orf232A0A0U1RR37 186 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 MROH6A6NGR9 719 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 SPINT1O43278 529 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 PI15O43692 258 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 PIAS1O75925 651 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 ADH1BP00325 375 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 ADRB3P13945 408 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 GABRG2P18507 467 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 PGAM1P18669 254 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 C5AR1P21730 350 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 LHCGRP22888 699 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 HSD17B3P37058 310 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 TMPRSS15P98073 1019 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 ANKRD20A4Q4UJ75 823 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 TSTD2Q5T7W7 516 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 KIAA1324Q6UXG2 1013 aaKnown RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 C3orf62Q6ZUJ4 267 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 TRMT10CQ7L0Y3 403 aaKnown RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 SYT13Q7L8C5 426 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 OR13C4Q8NGS5 318 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 HMGB4Q8WW32 186 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 ZNF669Q96BR6 464 aaPredicted RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 SIPA1Q96FS4 1042 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 RANBP9Q96S59 729 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 GPR63Q9BZJ6 419 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 BPIFA1Q9NP55 256 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 LRRK1Q38SD2 2015 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 RIPK2O43353 540 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 DCXO43602 365 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 NEK3P51956 506 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 SLC29A2Q14542 456 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 CNGA3Q16281 694 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 TRMT10BQ6PF06 316 aaKnown RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 TMEM135Q86UB9 458 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 NDUFAF2Q8N183 169 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 GANCQ8TET4 914 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 HHIPQ96QV1 700 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 HDAC8Q9BY41 377 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 OSBPL6Q9BZF3 934 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 CHRDQ9H2X0 955 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
CLK4-210ENST00000522136 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 FBXL12Q9NXK8 326 aa13.41□□□□□ -0.26
CLK4-210ENST00000522136 DOCK9Q9BZ29 2069 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 ZCWPW2A0A1B0GU75 182 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 DYNC1I1O14576 645 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 ATG13O75143 517 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.26
CLK4-210ENST00000522136 CRTAMO95727 393 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 DNTTP04053 509 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 POLBP06746 335 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 ARSDP51689 593 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 DGKEP52429 567 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 RALGDSQ12967 914 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 MTAPQ13126 283 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 CRYMQ14894 314 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 STEAP4Q687X5 459 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 CWF19L1Q69YN2 538 aaKnown RBP13.4□□□□□ -0.26
CLK4-210ENST00000522136 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 MREGQ8N565 214 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 LYSMD1Q96S90 227 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 OMDQ99983 421 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
CLK4-210ENST00000522136 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
CLK4-210ENST00000522136 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 HACD3Q9P035 362 aa13.4□□□□□ -0.26
CLK4-210ENST00000522136 C2orf81A6NN90 581 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 AREL1O15033 823 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 USP1O94782 785 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 LPOP22079 712 aaPredicted RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 VIPR1P32241 457 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 MMP12P39900 470 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms