RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 C6orf141Q5SZD1 244 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ERMARDQ5T6L9 678 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 GPR139Q6DWJ6 353 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 LCTLQ6UWM7 567 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CRELD2Q6UXH1 353 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ARHGEF25Q86VW2 580 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 DNAJC10Q8IXB1 793 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 SYT2Q8N9I0 419 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 NEXN-AS1Q8NBZ9 246 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ENGASEQ8NFI3 743 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 OR14L1PQ8NHC6 308 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 TRPC4APQ8TEL6 797 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 PTPMT1Q8WUK0 201 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 RNF183Q96D59 192 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMEM68Q96MH6 324 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 BBS4Q96RK4 519 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CRAMP1Q96RY5 1269 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 NPFFR1Q9GZQ6 430 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 PLK3Q9H4B4 646 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CCDC177Q9NQR7 707 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 RRP7BPQ9NSQ0 103 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 MSRB1Q9NZV6 116 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 KLHL13Q9P2N7 655 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CRNNQ9UBG3 495 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ANAPC2Q9UJX6 822 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 PLAGL1Q9UM63 463 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 EXO1Q9UQ84 846 aaKnown RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CMAHPQ9Y471 501 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZNF335Q9H4Z2 1342 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 A0A096LPK6 155 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 SMIM35A0A1B0GVV1 85 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 CGB1A6NKQ9 187 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 A8MV72 311 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 PLRG1O43660 514 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC25A12O75746 678 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 PSMD10O75832 226 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 IFNA2P01563 188 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MYZAPP0CAP1 466 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 GNLYP22749 145 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 EPHB2P29323 1055 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MRPL12P52815 198 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 GALCP54803 685 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MFAP4P55083 255 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 TAS2R40P59535 323 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 SRSF1Q07955 248 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 LRMPQ12912 555 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 FOXF2Q12947 444 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 IKQ13123 557 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 CAPSQ13938 189 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 TCTN1Q2MV58 587 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZNF628Q5EBL2 1059 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 HMBOX1Q6NT76 420 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ATG9AQ7Z3C6 839 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 GLRX5Q86SX6 157 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ADIPOR2Q86V24 386 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 IGFN1Q86VF2 1251 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 DNAAF5Q86Y56 855 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ADGRF4Q8IZF3 695 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MINDY1Q8N5J2 469 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZBTB2Q8N680 514 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 LRRC57Q8N9N7 239 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMEM163Q8TC26 289 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 HASPINQ8TF76 798 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 FBXL8Q96CD0 374 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZG16BQ96DA0 208 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ACOX2Q99424 681 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MAK16Q9BXY0 300 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 KLHL4Q9C0H6 718 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 GPR88Q9GZN0 384 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 DENND2DQ9H6A0 471 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 AAMDCQ9H7C9 122 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMEM45AQ9NWC5 275 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 GDE1Q9NZC3 331 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 MRPL15Q9P015 296 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 IPO11Q9UI26 975 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 PCDHA12Q9UN75 941 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 AAR2Q9Y312 384 aaKnown RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 INSL6Q9Y581 213 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 STON1Q9Y6Q2 735 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC4A4Q9Y6R1 1079 aa3.53□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZNF541Q9H0D2 1346 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 LNP1A1A4G5 178 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 C1orf226A1L170 272 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 MANSC4A6NHS7 340 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 TTC36A6NLP5 189 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 SPRY1O43609 319 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 KIF1CO43896 1103 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 HS6ST1O60243 411 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 HNRNPCL1O60812 293 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 RAMP2O60895 175 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 NDUFS3O75489 264 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 DAB1O75553 588 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 JRKO75564 520 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 RPN1P04843 607 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 PRKCGP05129 697 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 SRPRAP08240 638 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms