RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 TMC7Q7Z402 723 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 DENND1CQ8IV53 801 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.99□□□□□ -0.81
SPARC-202ENST00000520687 HJURPQ8NCD3 748 aaPredicted RBP9.99□□□□□ -0.81
SPARC-202ENST00000520687 OR6P1Q8NGX9 317 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 KCTD4Q8WVF5 259 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 HDAC10Q969S8 669 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 TRIB3Q96RU7 358 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
SPARC-202ENST00000520687 TMEM39AQ9NV64 488 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 PNPOQ9NVS9 261 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 NLE1Q9NVX2 485 aaPredicted RBP9.99□□□□□ -0.81
SPARC-202ENST00000520687 ZNF358Q9NW07 568 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 MARCOQ9UEW3 520 aaPredicted RBP9.99□□□□□ -0.81
SPARC-202ENST00000520687 TMCO1Q9UM00 188 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 COMMD10Q9Y6G5 202 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 MYO18AQ92614 2054 aaKnown RBP9.99□□□□□ -0.81
SPARC-202ENST00000520687 CFAP54Q96N23 3096 aa9.99□□□□□ -0.81
SPARC-202ENST00000520687 C2orf81A6NN90 581 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 GOLGA8TH3BQL2 631 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 PRRG1O14668 218 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 CD3EAPO15446 510 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 PHGDHO43175 533 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 DLX3O60479 287 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 TM7SF2O76062 418 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 BAIAP3O94812 1187 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 SEC24AO95486 1093 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 THRAP10827 490 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 CR2P20023 1033 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 SAT1P21673 171 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 MAPK8P45983 427 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 SUOXP51687 545 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 COPAP53621 1224 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 ALDH18A1P54886 795 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 RPL26P61254 145 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 PFKPQ01813 784 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 TRMT5Q32P41 509 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 PSRC1Q6PGN9 363 aaPredicted RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 AFTPHQ6ULP2 937 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPARC-202ENST00000520687 RTL10Q7L3V2 364 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 NET1Q7Z628 596 aaPredicted RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 DNAJB7Q7Z6W7 309 aaPredicted RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 DEFB128Q7Z7B8 93 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 CEP97Q8IW35 865 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 CPSF7Q8N684 471 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 AGAP11Q8TF27 550 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 NXNL1Q96CM4 212 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 VN1R3Q9BXE9 311 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 COG4Q9H9E3 785 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 MRPL17Q9NRX2 175 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 NDE1Q9NXR1 346 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 AGO1Q9UL18 857 aaKnown RBP9.98□□□□□ -0.81
SPARC-202ENST00000520687 MTCH2Q9Y6C9 303 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 NUMBLQ9Y6R0 609 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 USP34Q70CQ2 3546 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 CHD9Q3L8U1 2897 aa9.98□□□□□ -0.81
SPARC-202ENST00000520687 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 DIAPH2O60879 1101 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 UPP2O95045 317 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 GJB5O95377 273 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 WISP3O95389 354 aaPredicted RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 SBK3P0C264 359 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 TFEBP19484 476 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 GLDCP23378 1020 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 ID4P47928 161 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 NAGLUP54802 743 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 NFKB2Q00653 900 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 HERC3Q15034 1050 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 TYSND1Q2T9J0 566 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 ARL13AQ5H913 290 aaPredicted RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 AARS2Q5JTZ9 985 aaKnown RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 MPP7Q5T2T1 576 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 RFWD3Q6PCD5 774 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 CNSTQ6PJW8 725 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 RINLQ6ZS11 566 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 KDELC2Q7Z4H8 507 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 TTC7BQ86TV6 843 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 CIR1Q86X95 450 aaPredicted RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 TREML1Q86YW5 311 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 FAM217AQ8IXS0 508 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 MAB21L3Q8N8X9 362 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 ACVR1CQ8NER5 493 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 OR4L1Q8NH43 312 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 RHEBL1Q8TAI7 183 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 HEXDCQ8WVB3 486 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 N4BP2L2Q92802 583 aaPredicted RBP9.97□□□□□ -0.81
SPARC-202ENST00000520687 MIPEPQ99797 713 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 EBF4Q9BQW3 602 aa9.97□□□□□ -0.81
SPARC-202ENST00000520687 IRF2BPLQ9H1B7 796 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms