RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PPM1FP49593 454 aaPredicted RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 EPHB1P54762 984 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 CXADRP78310 365 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 SLC25A11Q02978 314 aaKnown RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 TSR1Q2NL82 804 aaKnown RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 ARMC12Q5T9G4 340 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 BROXQ5VW32 411 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 LSMEM2Q8N112 164 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZNF248Q8NDW4 579 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 SNIP1Q8TAD8 396 aaKnown RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 FUBP1Q96AE4 644 aaKnown RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 ECHDC3Q96DC8 303 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 NOD2Q9HC29 1040 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 EPB41L5Q9HCM4 733 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 THSD1Q9NS62 852 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 GOLGA4Q13439 2230 aaKnown RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 A0A1W2PQ67 120 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 TMEM202A6NGA9 273 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 MFSD11O43934 449 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 MAFKO60675 156 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 SOCS5O75159 536 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 CYP1A2P05177 515 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 CD48P09326 243 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 KRT10P13645 584 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 PBX1P40424 430 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 KIAA1024LP59773 190 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 TRAF2Q12933 501 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 RAET1GQ6H3X3 334 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 DOK6Q6PKX4 331 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 USP45Q70EL2 814 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 NDUFAF2Q8N183 169 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 SDR16C5Q8N3Y7 309 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 PGBD5Q8N414 524 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 NIPA2Q8N8Q9 360 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 FAM46DQ8NEK8 389 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 KCNE4Q8WWG9 221 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 OR1E3Q8WZA6 343 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZNF578Q96N58 590 aaPredicted RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 GFM1Q96RP9 751 aaKnown RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZMYND15Q9H091 742 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 DPEP2Q9H4A9 486 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 CARS2Q9HA77 564 aaKnown RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 PHPT1Q9NRX4 125 aaPredicted RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 HAUS2Q9NVX0 235 aa16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZNHIT6Q9NWK9 470 aaKnown RBP16.18■□□□□ 0.18
IGHV3-42-201ENST00000520410 SPEGQ15772 3267 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 CFAP69A5D8W1 941 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 PDE2AO00408 941 aaPredicted RBP16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 TRAFD1O14545 582 aaPredicted RBP16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 CBFA2T2O43439 604 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 RPLP0P05388 317 aaKnown RBP16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 CNGA3Q16281 694 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 PNCKQ6P2M8 343 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 WDR48Q8TAF3 677 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 SEMA3CQ99985 751 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 MGME1Q9BQP7 344 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 CD84Q9UIB8 345 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 PHTF1Q9UMS5 762 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 ENTPD2Q9Y5L3 495 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 ANKRD36A6QL64 1941 aa16.17■□□□□ 0.18
IGHV3-42-201ENST00000520410 CASC3O15234 703 aaKnown RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 AKR1B10O60218 316 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 TCEA3O75764 348 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 H2AFZP0C0S5 128 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 ETV3P41162 512 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 GNPDA1P46926 289 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 LSSP48449 732 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 AGERQ15109 404 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 ATP13A4Q4VNC1 1196 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 KCTD16Q68DU8 428 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 TIGD7Q6NT04 549 aaPredicted RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 LVRNQ6Q4G3 990 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 H2AFVQ71UI9 128 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 HEATR4Q86WZ0 1026 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 JAMLQ86YT9 394 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 MAP7D3Q8IWC1 876 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 SPACA3Q8IXA5 215 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 ZNF830Q96NB3 372 aaPredicted RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 LGR4Q9BXB1 951 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 POLR1EQ9GZS1 481 aaKnown RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 TMEM168Q9H0V1 697 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 RCOR3Q9P2K3 495 aaPredicted RBP16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 RAI2Q9Y5P3 530 aa16.16■□□□□ 0.18
IGHV3-42-201ENST00000520410 PRSS38A1L453 326 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 NPIPB15A6NHN6 443 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 KLK10O43240 276 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 PGLSO95336 258 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 MYCLP1P12525 358 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms