RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 TNFSF8P32971 234 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 ACSM2AQ08AH3 577 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 KYNUQ16719 465 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 ESCO2Q56NI9 601 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 ACSM2BQ68CK6 577 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 PMS2CLQ68D20 193 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 FBXO46Q6PJ61 603 aaPredicted RBP7.61□□□□□ -1.19
LSM1-202ENST00000520286 CFAP77Q6ZQR2 320 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 SEPT14Q6ZU15 432 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 VSIG1Q86XK7 387 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 DENND6AQ8IWF6 608 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 CCDC13Q8IYE1 715 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 SYT2Q8N9I0 419 aaPredicted RBP7.61□□□□□ -1.19
LSM1-202ENST00000520286 APPL2Q8NEU8 664 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 HUS1BQ8NHY5 278 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 EME1Q96AY2 570 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 TMEM47Q9BQJ4 181 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 TUBB6Q9BUF5 446 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 AGO2Q9UKV8 859 aaKnown RBP7.61□□□□□ -1.19
LSM1-202ENST00000520286 HS3ST3A1Q9Y663 406 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 CEPT1Q9Y6K0 416 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 MAGI2Q86UL8 1455 aa7.61□□□□□ -1.19
LSM1-202ENST00000520286 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
LSM1-202ENST00000520286 MATN3O15232 486 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 TFPIP10646 304 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 HSPA1LP34931 641 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PTH2RP49190 550 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 STAT2P52630 851 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PPP5CP53041 499 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 TMPRSS3P57727 454 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 SORDQ00796 357 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 TFAP4Q01664 338 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ITGADQ13349 1161 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ARHGEF6Q15052 776 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ADIPOQQ15848 244 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 KRT24Q2M2I5 525 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PCGF3Q3KNV8 242 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 USP41Q3LFD5 358 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 SGO1Q5FBB7 561 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 C1orf141Q5JVX7 400 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ADALQ6DHV7 355 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 DENND5BQ6ZUT9 1274 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 MRGPRGQ86SM5 289 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 HAPLN4Q86UW8 402 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 SLC35F3Q8IY50 421 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PARP16Q8N5Y8 322 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 HJURPQ8NCD3 748 aaPredicted RBP7.6□□□□□ -1.19
LSM1-202ENST00000520286 SEMA6DQ8NFY4 1073 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 SNAPC3Q92966 411 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ZNF333Q96JL9 665 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 SLITRK1Q96PX8 696 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 LHPPQ9H008 270 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 HRH4Q9H3N8 390 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PDGFCQ9NRA1 345 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 TMEM45AQ9NWC5 275 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 ANKRD10Q9NXR5 420 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 PADI1Q9ULC6 663 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 UHRF1BP1Q6BDS2 1440 aa7.6□□□□□ -1.19
LSM1-202ENST00000520286 COL11A2P13942 1736 aaPredicted RBP7.59□□□□□ -1.19
LSM1-202ENST00000520286 hCG_1809904A0A1W2PP81 198 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 A0A1W2PPE2 198 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 A0A1W2PR64 198 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 LINC01548A6NM66 108 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 HSPA4LO95757 839 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 MMP3P08254 477 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 TBXAS1P24557 533 aaPredicted RBP7.59□□□□□ -1.19
LSM1-202ENST00000520286 ZBED6P86452 979 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 SOWAHAQ2M3V2 549 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 KIAA1614Q5VZ46 1190 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 MIS18BP1Q6P0N0 1132 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 LDLRAD3Q86YD5 345 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 FAM217AQ8IXS0 508 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 ZBTB2Q8N680 514 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 POGLUT1Q8NBL1 392 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 FIZ1Q96SL8 496 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 SEPT5Q99719 369 aaPredicted RBP7.59□□□□□ -1.19
LSM1-202ENST00000520286 B3GNT4Q9C0J1 378 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 WSB2Q9NYS7 404 aaPredicted RBP7.59□□□□□ -1.19
LSM1-202ENST00000520286 KLHL13Q9P2N7 655 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 ATP10AO60312 1499 aa7.59□□□□□ -1.19
LSM1-202ENST00000520286 TRBV5-3A0A0A0MS03 114 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 LRRC3CA6NJW4 275 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 PAPSS1O43252 624 aaPredicted RBP7.58□□□□□ -1.2
LSM1-202ENST00000520286 MITFO75030 526 aaPredicted RBP7.58□□□□□ -1.2
LSM1-202ENST00000520286 PROP1O75360 226 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 CLDN7O95471 211 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 IGLV2-14P01704 120 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 CAPZA2P47755 286 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 RPS13P62277 151 aaKnown RBP7.58□□□□□ -1.2
LSM1-202ENST00000520286 MRPS5P82675 430 aaKnown RBP7.58□□□□□ -1.2
LSM1-202ENST00000520286 GHRHRQ02643 423 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 KLF10Q13118 480 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 NAE1Q13564 534 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 LPIN1Q14693 890 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 CDONQ4KMG0 1287 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 SOWAHCQ53LP3 525 aaPredicted RBP7.58□□□□□ -1.2
LSM1-202ENST00000520286 ERMARDQ5T6L9 678 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 HIST2H2BCQ6DN03 193 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 HIST2H2BDQ6DRA6 164 aa7.58□□□□□ -1.2
LSM1-202ENST00000520286 RNF168Q8IYW5 571 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms