RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
SDC2-205ENST00000520233 IGHV1OR15-9A0A0B4J2B8 117 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 C1orf232A0A0U1RR37 186 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 SDR42E2A6NKP2 422 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 A8MX80 341 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 CLDN7O95471 211 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 CRTAMO95727 393 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 LHCGRP22888 699 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 MGAT1P26572 445 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TNFRSF8P28908 595 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 CD6P30203 668 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 ACSL1P33121 698 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 NUBP1P53384 320 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 SEMG2Q02383 582 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 LAMB3Q13751 1172 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 POU6F1Q14863 301 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TAF1AQ15573 450 aaPredicted RBP17.83■□□□□ 0.44
SDC2-205ENST00000520233 USP39Q53GS9 565 aaKnown RBP17.83■□□□□ 0.44
SDC2-205ENST00000520233 PCID2Q5JVF3 399 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TMEM31Q5JXX7 168 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 LRRC66Q68CR7 880 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 NEK5Q6P3R8 708 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 LIPIQ6XZB0 460 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 LYSMD3Q7Z3D4 306 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 GLT6D1Q7Z4J2 308 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TMC3Q7Z5M5 1100 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TSPAN33Q86UF1 283 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 TTC30BQ8N4P2 665 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 GPR161Q8N6U8 529 aaKnown RBP17.83■□□□□ 0.44
SDC2-205ENST00000520233 RLN3Q8WXF3 142 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 PWWP2AQ96N64 755 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 GPR63Q9BZJ6 419 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 PHACTR1Q9C0D0 580 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 ZFYVE1Q9HBF4 777 aa17.83■□□□□ 0.44
SDC2-205ENST00000520233 MTRF1LQ9UGC7 380 aaKnown RBP17.83■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3DA0A087WVF3 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3IA0A087WXS9 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3EA0A087X179 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3KA0A087X1G2 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 HEATR9A2RTY3 570 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3FA6NER0 549 aaPredicted RBP17.82■□□□□ 0.44
SDC2-205ENST00000520233 LRRC72A6NJI9 287 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3LB9A6J9 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 E7ESA3 106 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 PSMD11O00231 422 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 AURKAO14965 403 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 EIF3HO15372 352 aaKnown RBP eCLIP17.82■□□□□ 0.442e-19■■□□□ 13
SDC2-205ENST00000520233 PCDH8O95206 1070 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 ELFN1P0C7U0 828 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3HP0C7X1 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 ADRA1DP25100 572 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 ECHS1P30084 290 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 FNTBP49356 437 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 LIG3P49916 1009 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 PDE1BQ01064 536 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 MTM1Q13496 603 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 CNGA3Q16281 694 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 ZNF528Q3MIS6 628 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3GQ6DHY5 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3CQ6IPX1 549 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 CENPUQ71F23 418 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 LONP2Q86WA8 852 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TBC1D3Q8IZP1 549 aaPredicted RBP17.82■□□□□ 0.44
SDC2-205ENST00000520233 CBARPQ8N350 705 aaPredicted RBP17.82■□□□□ 0.44
SDC2-205ENST00000520233 OR2T34Q8NGX1 318 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 CXorf40AQ8TE69 158 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 LRRC39Q96DD0 335 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 TOE1Q96GM8 510 aaKnown RBP17.82■□□□□ 0.44
SDC2-205ENST00000520233 SPACA7Q96KW9 195 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 SIGLEC10Q96LC7 697 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 FAM126AQ9BYI3 521 aaPredicted RBP17.82■□□□□ 0.44
SDC2-205ENST00000520233 SYBUQ9NX95 663 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.82■□□□□ 0.44
SDC2-205ENST00000520233 NFU1Q9UMS0 254 aa17.82■□□□□ 0.44
SDC2-205ENST00000520233 A0A0U1RQS6 177 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 MAGEB16A2A368 324 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 C2orf81A6NN90 581 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 LDB2O43679 373 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 MMP20O60882 483 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 SEMA4FO95754 770 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 LPOP22079 712 aaPredicted RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 HMGCLP35914 325 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 STC1P52823 247 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 PTSQ03393 145 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 SEPT6Q14141 434 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 BBS9Q3SYG4 887 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 MSS51Q4VC12 460 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 DENND2CQ68D51 928 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 KIAA1161Q6NSJ0 714 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 WDR93Q6P2C0 686 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 NLRP9Q7RTR0 991 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 AGGF1Q8N302 714 aaeCLIP17.81■□□□□ 0.44
SDC2-205ENST00000520233 MPP5Q8N3R9 675 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 PPHLN1Q8NEY8 458 aaKnown RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 PTCD2Q8WV60 388 aaKnown RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 NELL1Q92832 810 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 C19orf43Q9BQ61 176 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 WRAP53Q9BUR4 548 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms