RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GCNAQ96QF7 691 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 KIFC3Q9BVG8 833 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 HRH4Q9H3N8 390 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 AAMDCQ9H7C9 122 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 LTB4R2Q9NPC1 389 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 PADI1Q9ULC6 663 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ERVK-11Q9UQG0 969 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 PTRH2Q9Y3E5 179 aaKnown RBP5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 CMAHPQ9Y471 501 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 NFE2L3Q9Y4A8 694 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 A0A0G2JK05 382 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 MANSC4A6NHS7 340 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 B8ZZF3 427 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 PPP6CO00743 305 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 JRKO75564 520 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 NDUFB4O95168 129 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 KLKB1P03952 638 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 CD58P19256 250 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 COPB2P35606 906 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ACVRL1P37023 503 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 AVPR1AP37288 418 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 PTH2RP49190 550 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 CLCN3P51790 818 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 TAS2R40P59535 323 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 MRPS34P82930 218 aaKnown RBP5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 NAE1Q13564 534 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ERMARDQ5T6L9 678 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ADALQ6DHV7 355 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMEM71Q6P5X7 295 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 PATL1Q86TB9 770 aaKnown RBP5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 KBTBD6Q86V97 674 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 FAM9BQ8IZU0 186 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 MINDY1Q8N5J2 469 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 CEP76Q8TAP6 659 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMEM18Q96B42 140 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZFYVE19Q96K21 471 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ABHD1Q96SE0 405 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 EDEM3Q9BZQ6 932 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 LHPPQ9H008 270 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 NDST4Q9H3R1 872 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 ERVMER34-1Q9H9K5 563 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 FLRT1Q9NZU1 646 aa5.44□□□□□ -1.54
HMGB1P46-201ENST00000520062 FAM170AA1A519 330 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMEM202A6NGA9 273 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 LRRC72A6NJI9 287 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 A8MXE2 369 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 MDM4O15151 490 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 GPTP24298 496 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 ACADLP28330 430 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 LIG4P49917 911 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 RAD23AP54725 363 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 CDH12P55289 794 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 SORDQ00796 357 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 FHL2Q14192 279 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 C9orf152Q5JTZ5 239 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 RARS2Q5T160 578 aaKnown RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 STRIP1Q5VSL9 837 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 FBXO46Q6PJ61 603 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 VSIG1Q86XK7 387 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 SCCPDHQ8NBX0 429 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 HJURPQ8NCD3 748 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 APPL2Q8NEU8 664 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 TRPC4APQ8TEL6 797 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 DUSP19Q8WTR2 217 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 IGSF8Q969P0 613 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 PGAP3Q96FM1 320 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 PPP1R13BQ96KQ4 1090 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 KLHL4Q9C0H6 718 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 DDX4Q9NQI0 724 aaKnown RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 CYSLTR2Q9NS75 346 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 ARHGEF38Q9NXL2 777 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 COPG2Q9UBF2 871 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 FBXW11Q9UKB1 542 aa5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 PPIEQ9UNP9 301 aaKnown RBP5.43□□□□□ -1.54
HMGB1P46-201ENST00000520062 hCG_1809904A0A1W2PP81 198 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 A0A1W2PPE2 198 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 A0A1W2PR64 198 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 WIPF3A6NGB9 483 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TSPY2A6NKD2 308 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 AKR1B15C9JRZ8 316 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 STMND1H3BQB6 276 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CHL1O00533 1208 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 OGG1O15527 345 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TLR2O60603 784 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TBX10O75333 385 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 GPC4O75487 556 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 HIST1H2ABP04908 130 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TSPY3P0CV98 308 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TSPY8P0CW00 308 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 GLULP15104 373 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 DDX5P17844 614 aaKnown RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TRIM21P19474 475 aaKnown RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 HIST1H2ADP20671 130 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 HOXC9P31274 260 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CAPZA2P47755 286 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 RAD23BP54727 409 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 UBXN2AP68543 259 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TSPY1Q01534 308 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 GAD2Q05329 585 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms