RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 ITKQ08881 620 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 ISXQ2M1V0 245 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 TBC1D25Q3MII6 688 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 BBS5Q8N3I7 341 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 KCTD6Q8NC69 237 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 ATL2Q8NHH9 583 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 LRRN4Q8WUT4 740 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 SCG3Q8WXD2 468 aaKnown RBP17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 MGME1Q9BQP7 344 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 SYNDIG1Q9H7V2 258 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 MOSPD1Q9UJG1 213 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 NENFQ9UMX5 172 aa17.58■□□□□ 0.4
ARFGAP1-213ENST00000520022 SHROOM3Q8TF72 1996 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 A0A0U1RQS6 177 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 CACNB4O00305 520 aaPredicted RBP17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 RRP8O43159 456 aaKnown RBP17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 MFSD11O43934 449 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 SOCS5O75159 536 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 VIPR1P32241 457 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 ARSEP51690 589 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 TAS2R40P59535 323 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 DPYSL3Q14195 570 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 CNGA3Q16281 694 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 PNCKQ6P2M8 343 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 GKN2Q86XP6 184 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 KYQ8NBH2 561 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 OR56A4Q8NGH8 313 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 SNIP1Q8TAD8 396 aaKnown RBP17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 FAM71BQ8TC56 605 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 NAT6Q93015 286 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 ATXN7L3BQ96GX2 97 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 NAF1Q96HR8 494 aaKnown RBP17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 COQ10AQ96MF6 247 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 CCDC3Q9BQI4 270 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 RAI2Q9Y5P3 530 aa17.57■□□□□ 0.4
ARFGAP1-213ENST00000520022 PROSCO94903 275 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 TPM3P06753 285 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 CTPS1P17812 591 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 PTMSP20962 102 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 HNRNPH3P31942 346 aaKnown RBP17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 TRIM23P36406 574 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 LSSP48449 732 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 KIAA1024LP59773 190 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 SOWAHCQ53LP3 525 aaPredicted RBP17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 ANKRD20A8PQ5CZ79 823 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 C3orf38Q5JPI3 329 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 NCBP2-AS2Q69YL0 99 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 LVRNQ6Q4G3 990 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 RBM44Q6ZP01 1051 aaKnown RBP17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 HSD11B1LQ7Z5J1 315 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 TAF8Q7Z7C8 310 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 ARL10Q8N8L6 244 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 TPCN2Q8NHX9 752 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 NUS1Q96E22 293 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 SMIM14Q96QK8 99 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 SEMA3CQ99985 751 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 TMEM168Q9H0V1 697 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 SUDS3Q9H7L9 328 aaPredicted RBP17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 POLR1BQ9H9Y6 1135 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 RCOR3Q9P2K3 495 aaPredicted RBP17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 SATB2Q9UPW6 733 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 ENTPD2Q9Y5L3 495 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 DGKBQ9Y6T7 804 aa17.56■□□□□ 0.4
ARFGAP1-213ENST00000520022 A0A1W2PNU3 283 aaPredicted RBP17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 A0A1W2PQ67 120 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 HEXIM1O94992 359 aaKnown RBP17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 PGLSO95336 258 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 PDHA1P08559 390 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 H2AFZP0C0S5 128 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 LHCGRP22888 699 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 ETV3P41162 512 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 GARSP41250 739 aaKnown RBP17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 PAFAH1B3Q15102 231 aaKnown RBP17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 SLC18A3Q16572 532 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 ZFYVE27Q5T4F4 411 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 ARMC12Q5T9G4 340 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 FOXR1Q6PIV2 292 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 H2AFVQ71UI9 128 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 TSPAN33Q86UF1 283 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 SFTPA2Q8IWL1 248 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 TEX26Q8N6G2 289 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 FAM46DQ8NEK8 389 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 OR8K1Q8NGG5 319 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 CCL4L1Q8NHW4 92 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 CTNNBL1Q8WYA6 563 aaPredicted RBP17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 CCDC74AQ96AQ1 378 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 RBM15Q96T37 977 aaKnown RBP eCLIP17.55■□□□□ 0.48e-6■■□□□ 12.8
ARFGAP1-213ENST00000520022 WDR26Q9H7D7 661 aa17.55■□□□□ 0.4
ARFGAP1-213ENST00000520022 PMS2P1A4D2B8 440 aa17.54■□□□□ 0.4
ARFGAP1-213ENST00000520022 GOLGA6CA6NDK9 693 aa17.54■□□□□ 0.4
ARFGAP1-213ENST00000520022 GOLGA6BA6NDN3 693 aa17.54■□□□□ 0.4
ARFGAP1-213ENST00000520022 NPIPB15A6NHN6 443 aaPredicted RBP17.54■□□□□ 0.4
ARFGAP1-213ENST00000520022 HOXC4P09017 264 aaPredicted RBP17.54■□□□□ 0.4
ARFGAP1-213ENST00000520022 GOLGA6DP0CG33 693 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms