RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 SLC41A2Q96JW4 573 aa5.48□□□□□ -1.53
NPM1-206ENST00000519955 EBF3Q9H4W6 596 aa5.48□□□□□ -1.53
NPM1-206ENST00000519955 ERVK-11Q9UQG0 969 aa5.48□□□□□ -1.53
NPM1-206ENST00000519955 STON1Q9Y6Q2 735 aa5.48□□□□□ -1.53
NPM1-206ENST00000519955 FAM237BA0A1B0GVD1 139 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 DYTNA2CJ06 578 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 FAM90A8PA6NJQ4 464 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 LIPT2A6NK58 231 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 J3KR12 359 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 ZBED4O75132 1171 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 SERPINI2O75830 405 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 IPO7O95373 1038 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 EIF2S1P05198 315 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 FAM90A13PP0C7W8 464 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 FAM90A24PP0C7X0 464 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 DDX5P17844 614 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 CASP2P42575 452 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 PCYT1AP49585 367 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 NAP1L1P55209 391 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 ARF3P61204 181 aaPredicted RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 ARF1P84077 181 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 SORDQ00796 357 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 EGR4Q05215 589 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 NAE1Q13564 534 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 GPATCH4Q5T3I0 446 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 QSOX2Q6ZRP7 698 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 MTSS1LQ765P7 747 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 PDILTQ8N807 584 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 FAM216AQ8WUB2 273 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 MIB2Q96AX9 1013 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 TMEM68Q96MH6 324 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 TREX2Q9BQ50 279 aaPredicted RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 TMEM47Q9BQJ4 181 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 CHCHD6Q9BRQ6 235 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 SLC25A33Q9BSK2 321 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 ITPAQ9BY32 194 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 IFIH1Q9BYX4 1025 aaKnown RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 MKKSQ9NPJ1 570 aaPredicted RBP5.47□□□□□ -1.53
NPM1-206ENST00000519955 BLOC1S4Q9NUP1 217 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 LYVE1Q9Y5Y7 322 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 CEPT1Q9Y6K0 416 aa5.47□□□□□ -1.53
NPM1-206ENST00000519955 FAM237AA0A1B0GTK4 181 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 A0A1W2PQF6 199 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 INSIG1O15503 277 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 HSPA12AO43301 675 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 NTN1O95631 604 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 CH25HO95992 272 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 ZNF182P17025 639 aaPredicted RBP5.46□□□□□ -1.54
NPM1-206ENST00000519955 HNRNPH1P31943 449 aaKnown RBP5.46□□□□□ -1.54
NPM1-206ENST00000519955 NIPAL4Q0D2K0 466 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 LMOD3Q0VAK6 560 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 MMEL1Q495T6 779 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 CXorf66Q5JRM2 361 aaPredicted RBP5.46□□□□□ -1.54
NPM1-206ENST00000519955 METTL2BQ6P1Q9 378 aaKnown RBP5.46□□□□□ -1.54
NPM1-206ENST00000519955 ARHGAP12Q8IWW6 846 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 B4GALNT2Q8NHY0 566 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 POMGNT1Q8WZA1 660 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 SGCDQ92629 289 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 METTL2AQ96IZ6 378 aaKnown RBP5.46□□□□□ -1.54
NPM1-206ENST00000519955 TIGD1Q96MW7 591 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 TMEM204Q9BSN7 226 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 PLEKHA5Q9HAU0 1116 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 TBC1D22BQ9NU19 505 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 WNT16Q9UBV4 365 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 RCOR1Q9UKL0 485 aa5.46□□□□□ -1.54
NPM1-206ENST00000519955 AKR1B15C9JRZ8 316 aaPredicted RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 HNRNPCL1O60812 293 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 KCNJ13O60928 360 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ALPLP05186 524 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 PRSS2P07478 247 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 SNHG28P0DPA3 235 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 METAP2P50579 478 aaKnown RBP eCLIP5.45□□□□□ -1.54
NPM1-206ENST00000519955 F2RL1P55085 397 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 CEBPZQ03701 1054 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 MED22Q15528 200 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 C2orf68Q2NKX9 166 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 TTI2Q6NXR4 508 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ANKRD54Q6NXT1 300 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 SARM1Q6SZW1 724 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 FJX1Q86VR8 437 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ZC3HC1Q86WB0 502 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 IQCF1Q8N6M8 205 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 NEXN-AS1Q8NBZ9 246 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 USP6NLQ92738 828 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 PHF21BQ96EK2 531 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 SH3GL2Q99962 352 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 C1QTNF5Q9BXJ0 243 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ESRP2Q9H6T0 727 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 POLR1BQ9H9Y6 1135 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 GPR108Q9NPR9 543 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 HINT3Q9NQE9 182 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 EIF2B3Q9NR50 452 aaKnown RBP5.45□□□□□ -1.54
NPM1-206ENST00000519955 HCFC1R1Q9NWW0 138 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 CDC14AQ9UNH5 594 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 ADAM18Q9Y3Q7 739 aa5.45□□□□□ -1.54
NPM1-206ENST00000519955 RUSC2Q8N2Y8 1516 aa5.44□□□□□ -1.54
NPM1-206ENST00000519955 A0A0U1RQJ8 604 aa5.44□□□□□ -1.54
NPM1-206ENST00000519955 CLEC18AA5D8T8 446 aa5.44□□□□□ -1.54
NPM1-206ENST00000519955 ZIC3O60481 467 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms