RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CAPNS1P04632 268 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 C2P06681 752 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ENO1P06733 434 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 RPSAP08865 295 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 SBK3P0C264 359 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SRGAP2BP0DMP2 458 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ERVK-10P10266 1014 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ODC1P11926 461 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 CPA3P15088 417 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ANPEPP15144 967 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TYK2P29597 1187 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MLH1P40692 756 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 RGS2P41220 211 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ARCN1P48444 511 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 COPAP53621 1224 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 CACNA2D1P54289 1103 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MAP3K7CLP57077 242 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 INHBEP58166 350 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 DNAJB13P59910 316 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 AP2B1P63010 937 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 PDE1BQ01064 536 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 NSUN2Q08J23 767 aaKnown RBP eCLIP5.1□□□□□ -1.59
SDC2-204ENST00000519914 GALNT1Q10472 559 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 LAMB3Q13751 1172 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 PRPSAP1Q14558 356 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 RFTN1Q14699 578 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 MAPRE1Q15691 268 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 SLC14A2Q15849 920 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 KCNMB1Q16558 191 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 UGP2Q16851 508 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 FBLN7Q53RD9 439 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 FSCBQ5H9T9 825 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 LIPMQ5VYY2 423 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TWF2Q6IBS0 349 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 KIAA0930Q6ICG6 404 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 DENND5AQ6IQ26 1287 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MSANTD2Q6P1R3 559 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 CASC4Q6P4E1 433 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 PKN3Q6P5Z2 889 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SLC23A3Q6PIS1 610 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 NXPE4Q6UWF7 544 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ZCCHC23Q6ZST2 131 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 KIAA0408Q6ZU52 694 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 GPRIN1Q7Z2K8 1008 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ARHGAP22Q7Z5H3 698 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 UBE3DQ7Z6J8 389 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 STRA8Q7Z7C7 330 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SETD3Q86TU7 594 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 RSPH3Q86UC2 560 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TAC4Q86UU9 113 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SERINC5Q86VE9 423 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 KCNMB4Q86W47 210 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ZC3HC1Q86WB0 502 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 C12orf40Q86WS4 652 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TMEM126BQ8IUX1 230 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 KIRREL3Q8IZU9 778 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 CNTD1Q8N815 330 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 CCNYQ8ND76 341 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 FBXO27Q8NI29 283 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 PPP1R14CQ8TAE6 165 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 GRIN3AQ8TCU5 1115 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 URGCPQ8TCY9 931 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 DQX1Q8TE96 717 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 STYXQ8WUJ0 223 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 NRG4Q8WWG1 115 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 NDRG1Q92597 394 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 STMN2Q93045 179 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MYLPFQ96A32 169 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TADA1Q96BN2 335 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ZNF669Q96BR6 464 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 SPDL1Q96EA4 605 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 VPS39Q96JC1 886 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MAELQ96JY0 434 aaKnown RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 C1orf74Q96LT6 269 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 GPR78Q96P69 363 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 PANX3Q96QZ0 392 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 EBF4Q9BQW3 602 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MTG1Q9BT17 334 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 MED10Q9BTT4 135 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 APOL6Q9BWW8 343 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 DRC3Q9H069 523 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SMOC2Q9H3U7 446 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 WDCPQ9H6R7 721 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 ATP13A1Q9HD20 1204 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 DMAP1Q9NPF5 467 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 TREX1Q9NSU2 369 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 DDIT4Q9NX09 232 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 MIOSQ9NXC5 875 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TUBA8Q9NY65 449 aaPredicted RBP5.1□□□□□ -1.59
SDC2-204ENST00000519914 HACD3Q9P035 362 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 TXNDC16Q9P2K2 825 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 VTI1BQ9UEU0 232 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 WDR37Q9Y2I8 494 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 RAP2CQ9Y3L5 183 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 NR2E3Q9Y5X4 410 aa5.1□□□□□ -1.59
SDC2-204ENST00000519914 GMEB1Q9Y692 573 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms